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阿克曼氏菌属新种,黏液阿克曼氏菌新种,肺阿克曼氏菌新种和灵巧阿克曼氏菌新种,源自人类临床样本。

Achromobacter animicus sp. nov., Achromobacter mucicolens sp. nov., Achromobacter pulmonis sp. nov. and Achromobacter spiritinus sp. nov., from human clinical samples.

机构信息

Laboratorium voor Microbiologie, Vakgroep Biochemie en microbiologie, Faculteit Wetenschappen, Universiteit Gent, Belgium.

出版信息

Syst Appl Microbiol. 2013 Feb;36(1):1-10. doi: 10.1016/j.syapm.2012.10.003. Epub 2012 Dec 6.

Abstract

The phenotypic and genotypic characteristics of fourteen human clinical Achromobacter strains representing four genogroups which were delineated by sequence analysis of nusA, eno, rpoB, gltB, lepA, nuoL and nrdA loci, demonstrated that they represent four novel Achromobacter species. The present study also characterized and provided two additional reference strains for Achromobacter ruhlandii and Achromobacter marplatensis, species for which, thus far, only single strains are publicly available, and further validated the use of 2.1% concatenated nusA, eno, rpoB, gltB, lepA, nuoL and nrdA sequence divergence as a threshold value for species delineation in this genus. Finally, although most Achromobacter species can be distinguished by biochemical characteristics, the present study also highlighted considerable phenotypic intraspecies variability and demonstrated that the type strains may be phenotypically poor representatives of the species. We propose to classify the fourteen human clinical strains as Achromobacter mucicolens sp. nov. (with strain LMG 26685(T) [=CCUG 61961(T)] as the type strain), Achromobacter animicus sp. nov. (with strain LMG 26690(T) [=CCUG 61966(T)] as the type strain), Achromobacter spiritinus sp. nov. (with strain LMG 26692(T) [=CCUG 61968(T)] as the type strain), and Achromobacter pulmonis sp. nov. (with strain LMG 26696(T) [=CCUG 61972(T)] as the type strain).

摘要

十四株代表四个基因群的人类临床不动杆菌菌株的表型和基因型特征,通过 nusA、eno、rpoB、gltB、lepA、nuoL 和 nrdA 基因座的序列分析进行了划分,表明它们代表了四个新的不动杆菌种。本研究还对 Achromobacter ruhlandii 和 Achromobacter marplatensis 两种细菌进行了特征描述,并提供了两个额外的参考菌株,这两种细菌到目前为止只有单株可供公开使用,进一步验证了使用 2.1%的串联 nusA、eno、rpoB、gltB、lepA、nuoL 和 nrdA 序列差异作为该属种划分的阈值值。最后,尽管大多数不动杆菌种可以通过生化特征来区分,但本研究还强调了相当大的表型种内变异性,并表明模式株可能是该物种的表型较差代表。我们建议将十四株人类临床分离株分类为粘质不动杆菌新种(以 LMG 26685(T) [=CCUG 61961(T)]为模式株)、动性阿克曼氏菌新种(以 LMG 26690(T) [=CCUG 61966(T)]为模式株)、灵杆菌新种(以 LMG 26692(T) [=CCUG 61968(T)]为模式株)和肺形不动杆菌新种(以 LMG 26696(T) [=CCUG 61972(T)]为模式株)。

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