Laboratory for Medical Microbiology and Infection Control, Amphia Hospital, Breda, The Netherlands.
Clin Infect Dis. 2013 Feb;56(4):478-87. doi: 10.1093/cid/cis929. Epub 2012 Dec 14.
The worldwide prevalence of extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae is increasing rapidly both in hospitals and in the community. A connection between ESBL-producing bacteria in food animals, retail meat, and humans has been suggested. We previously reported on the genetic composition of a collection of ESBL-producing Escherichia coli (ESBL-EC) from chicken meat and humans from a restricted geographic area. Now, we have extended the analysis with plasmid replicons, virulence factors, and highly discriminatory genomic profiling methods.
One hundred forty-five ESBL-EC isolates from retail chicken meat, human rectal carriers, and blood cultures were analyzed using multilocus sequence typing, phylotyping, ESBL genes, plasmid replicons, virulence genes, amplified fragment length polymorphism (AFLP), and pulsed-field gel electrophoresis (PFGE).
Three source groups overlapped substantially when their genetic composition was compared. A combined analysis using all variables yielded the highest resolution (Wilks lambda [Λ]: 0.08). Still, a prediction model based on the combined data classified 40% of the human isolates as chicken meat isolates. AFLP and PFGE showed that the isolates from humans and chicken meat could not be segregated and identified 1 perfect match between humans and chicken meat.
We found significant genetic similarities among ESBL-EC isolates from chicken meat and humans according to mobile resistance elements, virulence genes, and genomic backbone. Therefore, chicken meat is a likely contributor to the recent emergence of ESBL-EC in human infections in the study region. This raises serious food safety questions regarding the abundant presence of ESBL-EC in chicken meat.
产超广谱β-内酰胺酶(ESBL)的肠杆菌科在医院和社区中迅速广泛传播。有人提出,食源性动物、零售肉类和人类中的 ESBL 产生细菌之间存在联系。我们之前报道了来自特定地理区域的鸡肉和人类中 ESBL 产生的大肠杆菌(ESBL-EC)的遗传组成。现在,我们使用质粒复制子、毒力因子和高度区分的基因组分析方法扩展了分析。
使用多位点序列分型、 phylotyping、ESBL 基因、质粒复制子、毒力基因、扩增片段长度多态性(AFLP)和脉冲场凝胶电泳(PFGE)对来自零售鸡肉、人类直肠携带者和血液培养物的 145 株 ESBL-EC 分离株进行分析。
当比较其遗传组成时,三个来源组重叠很大。使用所有变量进行的综合分析产生了最高分辨率(Wilks lambda [Λ]:0.08)。尽管如此,基于组合数据的预测模型将 40%的人类分离株分类为鸡肉分离株。AFLP 和 PFGE 表明,来自人类和鸡肉的分离株无法分离,并确定了 1 个人类和鸡肉之间的完全匹配。
根据移动抗性元件、毒力基因和基因组骨干,我们发现鸡肉和人类的 ESBL-EC 分离株之间存在显著的遗传相似性。因此,鸡肉可能是研究区域中人类感染中最近出现的 ESBL-EC 的一个重要来源。这引发了有关鸡肉中大量存在 ESBL-EC 的严重食品安全问题。