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海洋诺卡氏菌,新种,从沿海海水分离得到。

Nocardioides marinquilinus sp. nov., isolated from coastal seawater.

机构信息

Microbial Oceanography Laboratory, School of Earth and Environmental Sciences and Research Institute of Oceanography, Seoul National University, 599 Gwanak-ro, Gwanak-gu, Seoul 151-742, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2013 Jul;63(Pt 7):2594-2599. doi: 10.1099/ijs.0.047902-0. Epub 2012 Dec 21.

Abstract

A Gram-stain-positive, non-motile, strictly aerobic, non-spore-forming and short rod-shaped bacterial strain, CL-GY44(T), was isolated from coastal seawater, Korea. Analysis of the 16S rRNA gene sequence of strain CL-GY44(T) revealed a clear affiliation with the genus Nocardioides. Based on phylogenetic analysis, strain CL-GY44(T) showed the closest phylogenetic relationship with Nocardioides ginsengagri BX5-10(T) and Nocardioides plantarum NCIMB 12834(T). Strain CL-GY44(T) was not able to grow in the presence of NaCl but grew with 0-5.5 % sea salts. The optimum temperature and pH for growth were 30 °C and pH 7.0. The major cellular fatty acids of strain CL-GY44(T) were C17 : 1ω6c, iso-C16 : 0, C16 : 0 and iso-C15 : 0 and the major menaquinone was MK-8(H4). The cell-wall analysis showed that strain CL-GY44(T) contained ll-diaminopimelic acid. The genomic DNA G+C content was 71.6 mol%. The combined phenotypic, chemotaxonomic and phylogenetic data showed that strain CL-GY44(T) could be clearly distinguished from members of the genus Nocardioides. Thus, strain CL-GY44(T) should be classified as representing a novel species in the genus Nocardioides, for which the name Nocardioides marinquilinus sp. nov. is proposed. The type strain is CL-GY44(T) ( = KCCM 90109(T) = JCM 18459(T)).

摘要

一株革兰氏阳性、非运动、严格需氧、不产芽孢的短杆状细菌菌株 CL-GY44(T),从韩国沿海海水分离得到。CL-GY44(T)菌株的 16S rRNA 基因序列分析表明,其与诺卡氏菌属具有明确的亲缘关系。基于系统发育分析,CL-GY44(T)菌株与 Nocardioides ginsengagri BX5-10(T)和 Nocardioides plantarum NCIMB 12834(T)的亲缘关系最近。CL-GY44(T)菌株不能在有 NaCl 的情况下生长,但能在 0-5.5%的海盐中生长。生长的最适温度和 pH 值分别为 30°C 和 pH 7.0。CL-GY44(T)菌株的主要细胞脂肪酸为 C17 : 1ω6c、iso-C16 : 0、C16 : 0 和 iso-C15 : 0,主要的menaquinone 为 MK-8(H4)。细胞壁分析表明,CL-GY44(T)菌株含有 ll-二氨基庚二酸。基因组 DNA G+C 含量为 71.6 mol%。综合表型、化学分类和系统发育数据表明,CL-GY44(T)菌株与诺卡氏菌属的其他成员明显不同。因此,CL-GY44(T)菌株应被归类为诺卡氏菌属的一个新种,命名为 Nocardioides marinquilinus sp. nov.。其模式菌株为 CL-GY44(T)(=KCCM 90109(T)=JCM 18459(T))。

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