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孙川湾泥滩解聚菌,一种泥滩解聚菌。

Chitinibacter suncheonensis sp. nov., a chitinolytic bacterium from a mud flat in Suncheon Bay.

机构信息

Department of Agricultural Chemistry, Sunchon National University, Suncheon 540-950, Republic of Korea.

出版信息

J Microbiol. 2012 Dec;50(6):1058-62. doi: 10.1007/s12275-012-2333-9. Epub 2012 Dec 30.

Abstract

A chitinolytic bacterium, designated strain SK16(T), was isolated from a mud flat in Suncheon Bay, Republic of Korea. Strain SK16(T) is Gram-negative, strictly aerobic, motile by a polar flagellum, and short rod-shaped. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain belonged to the genus Chitinibacter and was most closely related to Chitinibacter tainanensis S1(T) (98.2% similarity). DNA-DNA hybridization analyses showed a low association value of 20.45±4.08% between them. The major cellular fatty acids, the G+C content of the genomic DNA, and the predominant quinone of the strain were summed feature 3 (iso-C(15:0) 2-OH and/or C(16:1) ω7c; 50.5%) and C(12:0) (12.5%), 52.26 mol%, and Q-8, respectively. Based on the phylogenetic, chemotaxonomic, and phenotypic properties, strain SK16(T) represents a novel species of the genus Chitinibacter, for which the name Chitinibacter suncheonensis sp. nov. is proposed. The type strain is SK16(T) (=KCTC 23839(T) =DSM 25421(T)).

摘要

一株几丁质分解菌,命名为 SK16(T) 菌株,从韩国顺天湾的泥滩中分离得到。SK16(T) 菌株是革兰氏阴性、严格需氧、通过极生鞭毛运动的短杆状细菌。基于 16S rRNA 基因序列的系统发育分析表明,该菌株属于 Chitinibacter 属,与 Chitinibacter tainanensis S1(T)(相似度为 98.2%)最为密切相关。DNA-DNA 杂交分析表明它们之间的关联值较低,为 20.45±4.08%。该菌株的主要细胞脂肪酸、基因组 DNA 的 G+C 含量和主要醌分别为 sum 功能 3(iso-C(15:0) 2-OH 和/或 C(16:1) ω7c;50.5%)和 C(12:0)(12.5%)、52.26 mol%和 Q-8。基于系统发育、化学分类和表型特性,菌株 SK16(T) 代表 Chitinibacter 属的一个新种,命名为 Chitinibacter suncheonensis sp. nov.。其模式菌株为 SK16(T)(=KCTC 23839(T)=DSM 25421(T))。

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