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通过逆转 DNA 损伤进行 DNA 修复。

DNA repair by reversal of DNA damage.

机构信息

State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing 100871, China.

出版信息

Cold Spring Harb Perspect Biol. 2013 Jan 1;5(1):a012575. doi: 10.1101/cshperspect.a012575.

DOI:10.1101/cshperspect.a012575
PMID:23284047
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3579392/
Abstract

Endogenous and exogenous factors constantly challenge cellular DNA, generating cytotoxic and/or mutagenic DNA adducts. As a result, organisms have evolved different mechanisms to defend against the deleterious effects of DNA damage. Among these diverse repair pathways, direct DNA-repair systems provide cells with simple yet efficient solutions to reverse covalent DNA adducts. In this review, we focus on recent advances in the field of direct DNA repair, namely, photolyase-, alkyltransferase-, and dioxygenase-mediated repair processes. We present specific examples to describe new findings of known enzymes and appealing discoveries of new proteins. At the end of this article, we also briefly discuss the influence of direct DNA repair on other fields of biology and its implication on the discovery of new biology.

摘要

内源性和外源性因素不断挑战细胞 DNA,产生细胞毒性和/或诱变 DNA 加合物。因此,生物体已经进化出不同的机制来抵御 DNA 损伤的有害影响。在这些不同的修复途径中,直接 DNA 修复系统为细胞提供了简单而有效的方法来逆转共价 DNA 加合物。在这篇综述中,我们重点介绍了直接 DNA 修复领域的最新进展,即光解酶、烷基转移酶和双加氧酶介导的修复过程。我们提供了具体的例子来描述已知酶的新发现和新蛋白质的诱人发现。在本文的最后,我们还简要讨论了直接 DNA 修复对生物学其他领域的影响及其对新生物学发现的意义。

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DNA repair by reversal of DNA damage.通过逆转 DNA 损伤进行 DNA 修复。
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本文引用的文献

1
Duplex interrogation by a direct DNA repair protein in search of base damage.直接 DNA 修复蛋白通过双相检测寻找碱基损伤。
Nat Struct Mol Biol. 2012 Jun 3;19(7):671-6. doi: 10.1038/nsmb.2320.
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The DNA dioxygenase ALKBH2 protects Arabidopsis thaliana against methylation damage.DNA 双氧酶 ALKBH2 保护拟南芥免受甲基化损伤。
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anti-tumor effect of AlkB homolog 3 knockdown in hormone- independent prostate cancer cells.AlkB 同系物 3 敲低对激素非依赖性前列腺癌细胞的抗肿瘤作用。
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Changes in protein dynamics of the DNA repair dioxygenase AlkB upon binding of Fe(2+) and 2-oxoglutarate.DNA 修复双氧酶 AlkB 结合 Fe(2+)和 2-氧戊二酸后蛋白质动力学的变化。
Biochemistry. 2012 Apr 24;51(16):3334-41. doi: 10.1021/bi201699e. Epub 2012 Apr 9.
5
Alkbh2 protects against lethality and mutation in primary mouse embryonic fibroblasts.Alkbh2 可保护原代小鼠胚胎成纤维细胞免受致死性和突变的影响。
DNA Repair (Amst). 2012 May 1;11(5):502-10. doi: 10.1016/j.dnarep.2012.02.005. Epub 2012 Mar 17.
6
The Schizosaccharomyces pombe AlkB homolog Abh1 exhibits AP lyase activity but no demethylase activity.裂殖酵母 AlkB 同源物 Abh1 表现出 AP 裂解酶活性,但没有去甲基酶活性。
DNA Repair (Amst). 2012 May 1;11(5):453-62. doi: 10.1016/j.dnarep.2012.01.014. Epub 2012 Feb 23.
7
Thymine DNA glycosylase specifically recognizes 5-carboxylcytosine-modified DNA.胸腺嘧啶 DNA 糖基化酶特异性识别 5-羧基胞嘧啶修饰的 DNA。
Nat Chem Biol. 2012 Feb 12;8(4):328-30. doi: 10.1038/nchembio.914.
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Balancing repair and tolerance of DNA damage caused by alkylating agents.平衡烷化剂引起的 DNA 损伤的修复和耐受。
Nat Rev Cancer. 2012 Jan 12;12(2):104-20. doi: 10.1038/nrc3185.
9
Eukaryotic class II cyclobutane pyrimidine dimer photolyase structure reveals basis for improved ultraviolet tolerance in plants.真核生物 II 类环丁烷嘧啶二聚体光解酶结构揭示了植物提高耐紫外线能力的基础。
J Biol Chem. 2012 Apr 6;287(15):12060-9. doi: 10.1074/jbc.M111.244020. Epub 2011 Dec 14.
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Mechanisms and functions of Tet protein-mediated 5-methylcytosine oxidation.Tet 蛋白介导的 5-甲基胞嘧啶氧化的机制和功能。
Genes Dev. 2011 Dec 1;25(23):2436-52. doi: 10.1101/gad.179184.111.