• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Confessions of an icosahedral virus crystallographer.一位二十面体病毒晶体学家的自白。
Microscopy (Oxf). 2013 Feb;62(1):69-79. doi: 10.1093/jmicro/dfs097. Epub 2013 Jan 4.
2
Single particle cryo-electron microscopy and 3-D reconstruction of viruses.病毒的单颗粒冷冻电子显微镜技术与三维重构
Methods Mol Biol. 2014;1117:401-43. doi: 10.1007/978-1-62703-776-1_19.
3
Observation of Bacteriophage Ultrastructure by Cryo-electron Microscopy.通过冷冻电子显微镜观察噬菌体超微结构
Methods Mol Biol. 2018;1693:43-55. doi: 10.1007/978-1-4939-7395-8_5.
4
Three-dimensional asymmetric reconstruction of tailed bacteriophage.有尾噬菌体的三维不对称重建
Methods Enzymol. 2010;482:185-210. doi: 10.1016/S0076-6879(10)82008-7.
5
Symmetry-adapted spherical harmonics method for high-resolution 3D single-particle reconstructions.用于高分辨率三维单颗粒重建的对称适配球谐函数方法
J Struct Biol. 2008 Jan;161(1):64-73. doi: 10.1016/j.jsb.2007.09.016. Epub 2007 Oct 1.
6
Zernike phase contrast cryo-electron microscopy and tomography for structure determination at nanometer and subnanometer resolutions.泽尼克相衬低温电子显微镜术及其断层扫描技术在纳米和亚纳米分辨率下用于结构测定。
Structure. 2010 Aug 11;18(8):903-12. doi: 10.1016/j.str.2010.06.006.
7
Correcting for the ewald sphere in high-resolution single-particle reconstructions.在高分辨率单颗粒重建中校正埃瓦尔德球。
Methods Enzymol. 2010;482:369-80. doi: 10.1016/S0076-6879(10)82015-4.
8
Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs.为病毒生命周期增添第三维度:基于冷冻电子显微照片的二十面体病毒三维重建
Microbiol Mol Biol Rev. 1999 Dec;63(4):862-922, table of contents. doi: 10.1128/MMBR.63.4.862-922.1999.
9
Rapid increase of near atomic resolution virus capsid structures determined by cryo-electron microscopy.通过冷冻电镜快速解析近原子分辨率的病毒衣壳结构。
J Struct Biol. 2018 Jan;201(1):1-4. doi: 10.1016/j.jsb.2017.10.007. Epub 2017 Oct 27.
10
Tools for Model Building and Optimization into Near-Atomic Resolution Electron Cryo-Microscopy Density Maps.用于构建模型并优化至近原子分辨率电子冷冻显微镜密度图的工具。
Methods Enzymol. 2016;579:255-76. doi: 10.1016/bs.mie.2016.06.003. Epub 2016 Aug 12.

引用本文的文献

1
How the Protein Data Bank changed biology: An introduction to the JBC Reviews thematic series, part 1.蛋白质数据库如何改变生物学:JBC 综述特刊系列介绍,第 1 部分。
J Biol Chem. 2021 Jan-Jun;296:100608. doi: 10.1016/j.jbc.2021.100608. Epub 2021 Mar 27.
2
Icosahedral virus structures and the protein data bank.二十面体病毒结构与蛋白质数据库。
J Biol Chem. 2021 Jan-Jun;296:100554. doi: 10.1016/j.jbc.2021.100554. Epub 2021 Mar 17.
3
Breaking Symmetry in Viral Icosahedral Capsids as Seen through the Lenses of X-ray Crystallography and Cryo-Electron Microscopy.X 射线晶体学和冷冻电镜技术下观察到的病毒二十面体衣壳中的对称破缺。
Viruses. 2018 Feb 7;10(2):67. doi: 10.3390/v10020067.
4
Atomic cryo-EM structures of viruses.病毒的原子冷冻电镜结构。
Curr Opin Struct Biol. 2017 Oct;46:122-129. doi: 10.1016/j.sbi.2017.07.002. Epub 2017 Aug 5.
5
Enhancing and initiating phage-based therapies.加强和启动基于噬菌体的疗法。
Bacteriophage. 2014 Dec 15;4(4):e961869. doi: 10.4161/21597073.2014.961869. eCollection 2014.
6
Towards an integrative structural biology approach: combining Cryo-TEM, X-ray crystallography, and NMR.迈向整合结构生物学方法:结合冷冻电镜、X射线晶体学和核磁共振技术。
J Struct Funct Genomics. 2014 Sep;15(3):117-24. doi: 10.1007/s10969-014-9179-9. Epub 2014 Apr 20.
7
A cool hybrid approach to the herpesvirus 'life' cycle.疱疹病毒“生活”周期的一种很酷的混合方法。
Curr Opin Virol. 2014 Apr;5(100):42-9. doi: 10.1016/j.coviro.2014.01.008. Epub 2014 Feb 16.

本文引用的文献

1
Dynamics in cryo EM reconstructions visualized with maximum-likelihood derived variance maps.利用最大似然法推导的方差图可视化低温电子显微镜重构中的动态变化。
J Struct Biol. 2013 Mar;181(3):195-206. doi: 10.1016/j.jsb.2012.11.005. Epub 2012 Dec 12.
2
Nucleotide-resolution profiling of RNA recombination in the encapsidated genome of a eukaryotic RNA virus by next-generation sequencing.通过下一代测序对真核 RNA 病毒衣壳基因组中 RNA 重组进行核苷酸分辨率分析。
J Mol Biol. 2012 Dec 14;424(5):257-69. doi: 10.1016/j.jmb.2012.10.005. Epub 2012 Oct 13.
3
Movies of ice-embedded particles enhance resolution in electron cryo-microscopy.冰嵌入颗粒的电影提高了电子冷冻显微镜的分辨率。
Structure. 2012 Nov 7;20(11):1823-8. doi: 10.1016/j.str.2012.08.026. Epub 2012 Sep 27.
4
Packaging host RNAs in small RNA viruses: an inevitable consequence of an error-prone polymerase?小RNA病毒中包装宿主RNA:易出错的聚合酶的必然结果?
Cell Cycle. 2012 Oct 15;11(20):3713-4. doi: 10.4161/cc.22112. Epub 2012 Sep 14.
5
Maturation in action: CryoEM study of a viral capsid caught during expansion.在行动中成熟:冷冻电镜研究在扩张过程中捕获的病毒衣壳。
Structure. 2012 Aug 8;20(8):1384-90. doi: 10.1016/j.str.2012.05.011. Epub 2012 Jun 28.
6
Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus.真核单链 RNA 病毒将宿主 RNA(包括转座子)包裹起来。
Proc Natl Acad Sci U S A. 2012 Feb 7;109(6):1907-12. doi: 10.1073/pnas.1116168109. Epub 2012 Jan 24.
7
Mechanics of bacteriophage maturation.噬菌体成熟的机制。
Proc Natl Acad Sci U S A. 2012 Feb 14;109(7):2342-7. doi: 10.1073/pnas.1109590109. Epub 2012 Jan 30.
8
Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy.直接检测设备探测器用于单颗粒冷冻电子显微镜的初步评估。
J Struct Biol. 2011 Dec;176(3):404-8. doi: 10.1016/j.jsb.2011.09.002. Epub 2011 Sep 10.
9
Pass the jelly rolls.把果冻卷递过来。
Structure. 2011 Jul 13;19(7):904-6. doi: 10.1016/j.str.2011.06.004.
10
The Prohead-I structure of bacteriophage HK97: implications for scaffold-mediated control of particle assembly and maturation.噬菌体 HK97 的 Prohead-I 结构:对支架介导的颗粒组装和成熟控制的影响。
J Mol Biol. 2011 May 6;408(3):541-54. doi: 10.1016/j.jmb.2011.01.016. Epub 2011 Jan 27.

一位二十面体病毒晶体学家的自白。

Confessions of an icosahedral virus crystallographer.

作者信息

Johnson John E

机构信息

Department of Molecular Biology, MB31, The Scripps Research Institute, 10550 N. Torrey Pines Road, La Jolla, CA 92037, USA.

出版信息

Microscopy (Oxf). 2013 Feb;62(1):69-79. doi: 10.1093/jmicro/dfs097. Epub 2013 Jan 4.

DOI:10.1093/jmicro/dfs097
PMID:23291268
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3624677/
Abstract

This is a personal history of my structural studies of icosahedral viruses that evolved from crystallographic studies, to hybrid methods with electron cryo-microscopy and image reconstruction (cryoEM) and then developed further by incorporating a variety of physical methods to augment the high resolution crystallographic studies. It is not meant to be comprehensive, even for my own work, but hopefully provides some perspective on the growth of our understanding of these remarkable biologic assemblies. The goal is to provide a historical perspective for those new to the field and to emphasize the limitations of any one method, even those that provide atomic resolution information about viruses.

摘要

这是我对二十面体病毒结构研究的个人历程,该研究从晶体学研究起步,发展到结合电子冷冻显微镜和图像重建(冷冻电镜)的混合方法,之后通过纳入多种物理方法进一步拓展,以强化高分辨率晶体学研究。即便对于我自己的工作而言,本文也无意做到全面,而是希望能为我们对这些非凡生物聚集体的理解发展提供一些视角。目标是为该领域的新手提供一个历史视角,并强调任何一种方法的局限性,即使是那些能提供病毒原子分辨率信息的方法。