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背景选择 20 年回顾:Wilhelmine E. Key 2012 特邀讲座。

Background selection 20 years on: the Wilhelmine E. Key 2012 invitational lecture.

机构信息

the Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, King's Buildings, West Mains Road, Edinburgh EH9 3JT, UK.

出版信息

J Hered. 2013 Mar;104(2):161-71. doi: 10.1093/jhered/ess136. Epub 2013 Jan 8.

Abstract

The mutation process continually produces new deleterious variants at sites throughout the genome, which are then mostly eliminated by selection. This causes a reduction in variability at linked neutral or nearly neutral sites, as well as distortions of the genealogies of samples of alleles from a population. In regions of the genome where recombination is frequent, the effects of selection against deleterious mutations on variability and evolution at linked sites can be predicted under the assumption that most deleterious mutations have such large effects that their behavior in the population is effectively deterministic-this is background selection in the strict sense. But in genomic regions with little or no recombination, such as the Y chromosome, large departures from the predictions using deterministic models may occur, because of interference between different sites under selection. Evidence from Drosophila and human populations is discussed, which suggests that these processes play a major role in shaping patterns of DNA sequence variation and evolution, including the relative levels of variation on X chromosomes and autosomes, and the highly reduced variability seen in regions that lack crossing over.

摘要

突变过程不断在基因组的各个位点产生新的有害变异,这些变异随后大多被选择消除。这导致连锁的中性或近中性位点的变异性降低,以及种群中等位基因样本的系统发育发生扭曲。在基因组中重组频繁的区域,在假定大多数有害突变具有如此大的影响,以至于它们在种群中的行为实际上是确定性的情况下(这是严格意义上的背景选择),可以预测选择对连锁位点变异性和进化的影响。但在重组很少或没有的基因组区域,如 Y 染色体,由于不同位点之间的干扰,使用确定性模型的预测可能会出现较大偏差。来自果蝇和人类种群的证据表明,这些过程在塑造 DNA 序列变异和进化模式方面发挥着重要作用,包括 X 染色体和常染色体上的变异水平相对差异,以及在缺乏交叉的区域观察到的高度降低的变异性。

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