Department of Biochemistry, Molecular Biology & Biophysics, University of Minnesota, Minneapolis, Minnesota 55455, USA.
Protein Sci. 2013 Mar;22(3):327-46. doi: 10.1002/pro.2214. Epub 2013 Jan 27.
Reactive oxygen species (ROS) play crucial roles in physiology and pathology. In this report, we use NMR spectroscopy and mass spectrometry (MS) to demonstrate that proteins (galectin-1, ubiquitin, RNase, cytochrome c, myoglobin, and lysozyme) under reducing conditions with dithiothreitol (DTT) become alkylated at lysine-N(ζ) groups and O-phosphorylated at serine and threonine residues. These adduction reactions only occur in the presence of monophosphate, potassium, trace metals Fe/Cu, and oxygen, and are promoted by reactive oxygen species (ROS) generated via DTT oxidation. Superoxide mediates the chemistry, because superoxide dismutase inhibits the reaction, and hydroxyl and phosphoryl radicals are also likely involved. While lysine alkylation accounts for most of the adduction, low levels of phosphorylation are also observed at some serine and threonine residues, as determined by western blotting and MS fingerprinting. The adducted alkyl group is found to be a fragment of DTT that forms a Schiff base at lysine N(ζ) groups. Although its exact chemical structure remains unknown, the DTT fragment includes a SH group and a --CHOH--CH₂-- group. Chemical adduction appears to be promoted in the context of a well-folded protein, because some adducted sites in the proteins studied are considerably more reactive than others and the reaction occurs to a lesser extent with shorter, unfolded peptides and not at all with small organic molecules. A structural signature involving clusters of positively charged and other polar groups appears to facilitate the reaction. Overall, our findings demonstrate a novel reaction for DTT-mediated ROS chemistry with proteins.
活性氧(ROS)在生理和病理中发挥着关键作用。在本报告中,我们使用 NMR 光谱和质谱(MS)来证明,在还原条件下使用二硫苏糖醇(DTT)的蛋白质(半乳糖凝集素-1、泛素、核糖核酸酶、细胞色素 c、肌红蛋白和溶菌酶)在赖氨酸-N(ζ)基团上被烷基化,并在丝氨酸和苏氨酸残基上被 O-磷酸化。这些加合反应仅在存在一磷酸盐、钾、痕量金属 Fe/Cu 和氧气的情况下发生,并且是由 DTT 氧化产生的活性氧(ROS)促进的。超氧化物介导了这种化学变化,因为超氧化物歧化酶抑制了反应,而且羟基和磷酸自由基也可能参与其中。虽然赖氨酸烷基化占加合反应的大部分,但在一些丝氨酸和苏氨酸残基上也观察到低水平的磷酸化,这通过 Western 印迹和 MS 指纹图谱确定。加合的烷基部分被发现是 DTT 的一个片段,它在赖氨酸 N(ζ)基团上形成席夫碱。尽管其确切的化学结构仍不清楚,但 DTT 片段包括一个 SH 基团和一个 --CHOH--CH₂-- 基团。化学加合似乎在折叠良好的蛋白质环境中得到促进,因为研究中的蛋白质中一些加合位点比其他位点更具反应性,而且该反应在较短的、未折叠的肽中发生的程度较小,而在小分子有机化合物中根本不发生。涉及正电荷和其他极性基团簇的结构特征似乎促进了反应。总的来说,我们的发现证明了 DTT 介导的 ROS 化学与蛋白质之间的一种新反应。