Interfaculty Institute of Microbiology and Infection Medicine Tübingen, Cellular and Molecular Microbiology, University of Tübingen, Tübingen, Germany.
BMC Microbiol. 2013 Jan 16;13:7. doi: 10.1186/1471-2180-13-7.
Bacterial protein biosynthesis usually depends on a formylated methionyl start tRNA but Staphylococcus aureus is viable in the absence of Fmt, the tRNAMet formyl transferase. fmt mutants exhibit reduced growth rates indicating that the function of certain proteins depends on formylated N-termini but it has remained unclear, which cellular processes are abrogated by the lack of formylation.
In order to elucidate how global metabolic processes are affected by the absence of formylated proteins the exometabolome of an S. aureus fmt mutant was compared with that of the parental strain and the transcription of corresponding enzymes was analyzed to identify possible regulatory changes. The mutant consumed glucose and other carbon sources slower than the wild type. While the turnover of several metabolites remained unaltered fmt inactivation led to increases pyruvate release and, concomitantly, reduced pyruvate dehydrogenase activity. In parallel, the release of the pyruvate-derived metabolites lactate, acetoin, and alanine was reduced. The anaerobic degradation of arginine was also reduced in the fmt mutant compared to the wild-type strain. Moreover, the lack of formylated proteins caused increased susceptibility to the antibiotics trimethoprim and sulamethoxazole suggesting that folic acid-dependant pathways were perturbed in the mutant.
These data indicate that formylated proteins are crucial for specific bacterial metabolic processes and they may help to understand why it has remained important during bacterial evolution to initiate protein biosynthesis with a formylated tRNAMet.
细菌蛋白质生物合成通常依赖于甲酰化甲硫氨酰基起始 tRNA,但金黄色葡萄球菌在没有 tRNA 甲酰转移酶(fmt)的情况下也能存活。fmt 突变体的生长速度降低,表明某些蛋白质的功能依赖于甲酰化 N 端,但仍不清楚哪些细胞过程因缺乏甲酰化而被阻断。
为了阐明全局代谢过程如何受到缺乏甲酰化蛋白的影响,比较了金黄色葡萄球菌 fmt 突变体的外代谢组与亲本菌株的外代谢组,并分析了相应酶的转录,以确定可能的调控变化。突变体消耗葡萄糖和其他碳源的速度比野生型慢。虽然几种代谢物的周转率保持不变,但 fmt 失活导致丙酮酸释放增加,同时丙酮酸脱氢酶活性降低。同时,丙酮酸衍生的代谢物乳酸、乙酰醇和丙氨酸的释放减少。与野生型菌株相比,fmt 突变体中精氨酸的厌氧降解也减少。此外,缺乏甲酰化蛋白会导致对抗生素甲氧苄啶和磺胺甲恶唑的敏感性增加,这表明突变体中依赖叶酸的途径受到干扰。
这些数据表明,甲酰化蛋白对于特定的细菌代谢过程至关重要,它们可能有助于理解为什么在细菌进化过程中,用甲酰化 tRNA 甲酰转移酶启动蛋白质生物合成仍然很重要。