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对模拟正常小鼠胸腺细胞和白血病GRSL细胞膜的脂质双层进行分子动力学研究。

Molecular dynamics study of lipid bilayers modeling the plasma membranes of normal murine thymocytes and leukemic GRSL cells.

作者信息

Andoh Yoshimichi, Okazaki Susumu, Ueoka Ryuichi

机构信息

Department of Applied Chemistry, Nagoya University, Furo-cho, Chikusa-ku, Nagoya 464-8603, Japan.

出版信息

Biochim Biophys Acta. 2013 Apr;1828(4):1259-70. doi: 10.1016/j.bbamem.2013.01.005. Epub 2013 Jan 16.

Abstract

Molecular dynamics (MD) calculations for the plasma membranes of normal murine thymocytes and thymus-derived leukemic GRSL cells in water have been performed under physiological isothermal-isobaric conditions (310.15K and 1 atm) to investigate changes in membrane properties induced by canceration. The model membranes used in our calculations for normal and leukemic thymocytes comprised 23 and 25 kinds of lipids, respectively, including phosphatidylcholine, phosphatidylethanolamine, phosphatidylserine, phosphatidylinositol, sphingomyelin, lysophospholipids, and cholesterol. The mole fractions of the lipids adopted here were based on previously published experimental values. Our calculations clearly showed that the membrane area was increased in leukemic cells, and that the isothermal area compressibility of the leukemic plasma membranes was double that of normal cells. The calculated membranes of leukemic cells were thus considerably bulkier and softer in the lateral direction compared with those of normal cells. The tilt angle of the cholesterol and the conformation of the phospholipid fatty acid tails both showed a lower level of order in leukemic cell membranes compared with normal cell membranes. The lateral radial distribution function of the lipids also showed a more disordered structure in leukemic cell membranes than in normal cell membranes. These observations all show that, for the present thymocytes, the lateral structure of the membrane is considerably disordered by canceration. Furthermore, the calculated lateral self-diffusion coefficient of the lipid molecules in leukemic cell membranes was almost double that in normal cell membranes. The calculated rotational and wobbling autocorrelation functions also indicated that the molecular motion of the lipids was enhanced in leukemic cell membranes. Thus, here we have demonstrated that the membranes of thymocyte leukemic cells are more disordered and more fluid than normal cell membranes.

摘要

在生理等温等压条件(310.15K和1个大气压)下,对正常小鼠胸腺细胞和胸腺来源的白血病GRSL细胞的质膜进行了分子动力学(MD)计算,以研究癌变引起的膜性质变化。我们在计算正常和白血病胸腺细胞时使用的模型膜分别包含23种和25种脂质,包括磷脂酰胆碱、磷脂酰乙醇胺、磷脂酰丝氨酸、磷脂酰肌醇、鞘磷脂、溶血磷脂和胆固醇。这里采用的脂质摩尔分数基于先前发表的实验值。我们的计算清楚地表明,白血病细胞的膜面积增加,白血病细胞质膜的等温面积压缩率是正常细胞的两倍。因此,与正常细胞相比,白血病细胞的计算膜在横向方向上明显更厚且更软。与正常细胞膜相比,白血病细胞膜中胆固醇的倾斜角和磷脂脂肪酸尾部的构象都显示出较低的有序度。脂质的横向径向分布函数也表明,白血病细胞膜中的结构比正常细胞膜中的结构更无序。这些观察结果都表明,对于目前的胸腺细胞,膜的横向结构因癌变而明显紊乱。此外,白血病细胞膜中脂质分子的计算横向自扩散系数几乎是正常细胞膜中的两倍。计算出的旋转和摆动自相关函数也表明,白血病细胞膜中脂质的分子运动增强。因此,我们在此证明,胸腺细胞白血病细胞膜比正常细胞膜更无序且更具流动性。

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