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连接复合物在非同源末端连接过程中的非催化功能。

A noncatalytic function of the ligation complex during nonhomologous end joining.

机构信息

Centre National de la Recherche Scientifique, Institut de Pharmacologie et de Biologie Structurale, Toulouse F-31077, Cedex 4, France.

出版信息

J Cell Biol. 2013 Jan 21;200(2):173-86. doi: 10.1083/jcb.201203128.

DOI:10.1083/jcb.201203128
PMID:23337116
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3549972/
Abstract

Nonhomologous end joining is the primary deoxyribonucleic acid (DNA) double-strand break repair pathway in multicellular eukaryotes. To initiate repair, Ku binds DNA ends and recruits the DNA-dependent protein kinase (DNA-PK) catalytic subunit (DNA-PKcs) forming the holoenzyme. Early end synapsis is associated with kinase autophosphorylation. The XRCC4 (X4)-DNA Ligase IV (LIG4) complex (X4LIG4) executes the final ligation promoted by Cernunnos (Cer)-X4-like factor (XLF). In this paper, using a cell-free system that recapitulates end synapsis and DNA-PKcs autophosphorylation, we found a defect in both activities in human cell extracts lacking LIG4. LIG4 also stimulated the DNA-PKcs autophosphorylation in a reconstitution assay with purified components. We additionally uncovered a kinase autophosphorylation defect in LIG4-defective cells that was corrected by ectopic expression of catalytically dead LIG4. Finally, our data support a contribution of Cer-XLF to this unexpected early role of the ligation complex in end joining. We propose that productive end joining occurs by early formation of a supramolecular entity containing both DNA-PK and X4LIG4-Cer-XLF complexes on DNA ends.

摘要

非同源末端连接是真核多细胞生物中主要的脱氧核糖核酸(DNA)双链断裂修复途径。为了启动修复,Ku 结合 DNA 末端并招募依赖于 DNA 的蛋白激酶(DNA-PK)催化亚基(DNA-PKcs)形成全酶。早期末端连接与激酶自身磷酸化有关。XRCC4(X4)-DNA 连接酶 IV(LIG4)复合物(X4LIG4)执行由 Cernunnos(Cer)-X4 样因子(XLF)促进的最终连接。在本文中,我们使用一种体外无细胞系统来重现末端连接和 DNA-PKcs 自身磷酸化,发现缺乏 LIG4 的人细胞提取物在这两种活性上都存在缺陷。在使用纯化成分的重建测定中,LIG4 还刺激了 DNA-PKcs 的自身磷酸化。此外,我们还发现 LIG4 缺陷细胞存在激酶自身磷酸化缺陷,该缺陷可通过过表达无催化活性的 LIG4 得到纠正。最后,我们的数据支持 Cer-XLF 对连接复合物在末端连接中这种意外的早期作用的贡献。我们提出,有效的末端连接是通过在 DNA 末端早期形成包含 DNA-PK 和 X4LIG4-Cer-XLF 复合物的超分子实体来实现的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/3d0254229b37/JCB_201203128_Fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/747adb3693d9/JCB_201203128_Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/95260b102258/JCB_201203128_Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/6ce51e0282ef/JCB_201203128R_Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/5d34ace2f42d/JCB_201203128R_Fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/38051fc47c97/JCB_201203128_Fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/3d0254229b37/JCB_201203128_Fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/747adb3693d9/JCB_201203128_Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/95260b102258/JCB_201203128_Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/6ce51e0282ef/JCB_201203128R_Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/5d34ace2f42d/JCB_201203128R_Fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/38051fc47c97/JCB_201203128_Fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/003a/3549972/3d0254229b37/JCB_201203128_Fig6.jpg

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本文引用的文献

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Nucleic Acids Res. 2012 Feb;40(4):1868-78. doi: 10.1093/nar/gks022. Epub 2012 Jan 27.
2
Persistently bound Ku at DNA ends attenuates DNA end resection and homologous recombination.Ku 持续结合在 DNA 末端可减弱 DNA 末端切除和同源重组。
DNA Repair (Amst). 2012 Mar 1;11(3):310-6. doi: 10.1016/j.dnarep.2011.12.007. Epub 2012 Jan 20.
3
XRCC4's interaction with XLF is required for coding (but not signal) end joining.XRCC4 与 XLF 的相互作用是编码(而非信号)末端连接所必需的。
Senataxin RNA/DNA 解旋酶通过促进共转录 R 环处的复制重启动来防止 MUS81 依赖性叉降解。
Nucleic Acids Res. 2024 Sep 23;52(17):10355-10369. doi: 10.1093/nar/gkae673.
4
DNA-PK: A synopsis beyond synapsis.DNA-PK:超越联会的概述。
DNA Repair (Amst). 2024 Sep;141:103716. doi: 10.1016/j.dnarep.2024.103716. Epub 2024 Jul 8.
5
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Nat Commun. 2024 Feb 10;15(1):1250. doi: 10.1038/s41467-024-45553-z.
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4
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5
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Nucleic Acids Res. 2011 Jul;39(13):5757-67. doi: 10.1093/nar/gkr146. Epub 2011 Mar 30.
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Inhibition of homologous recombination by DNA-dependent protein kinase requires kinase activity, is titratable, and is modulated by autophosphorylation.DNA 依赖性蛋白激酶对同源重组的抑制需要激酶活性,是可滴定的,并受自身磷酸化调节。
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10
ATM damage response and XLF repair factor are functionally redundant in joining DNA breaks.ATM 损伤反应和 XLF 修复因子在连接 DNA 断裂中具有功能冗余性。
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