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聚合物拥挤剂和蛋白质拥挤剂对蛋白质折叠稳定性的作用相似。

Polymer crowders and protein crowders act similarly on protein folding stability.

机构信息

Department of Physics and Institute of Molecular Biophysics, Florida State University, Tallahassee, FL 32306, USA.

出版信息

FEBS Lett. 2013 Mar 1;587(5):394-7. doi: 10.1016/j.febslet.2013.01.030. Epub 2013 Jan 23.

DOI:10.1016/j.febslet.2013.01.030
PMID:23353683
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3581760/
Abstract

Recently a polymer crowder and two protein crowders were found to have opposite effects on the folding stability of chymotrypsin inhibitor 2 (CI2), suggesting that they interact differently with CI2. Here we propose that all the macromolecular crowders act similarly, with an entropic component favoring the folded state and an enthalpic component favoring the unfolded state. The net effect is destabilizing below a crossover temperature but stabilizing above it. This general trend is indeed observed in recent experiments and hints experimental temperature as a reason for the opposite crowding effects of the polymer and protein crowders.

摘要

最近发现一种聚合物致孔剂和两种蛋白质致孔剂对糜蛋白酶抑制剂 2(CI2)的折叠稳定性有相反的影响,表明它们与 CI2 的相互作用不同。在这里,我们提出所有的大分子致孔剂都以类似的方式起作用,其中熵分量有利于折叠状态,焓分量有利于展开状态。净效应在交叉温度以下是不稳定的,但在交叉温度以上是稳定的。这一总体趋势确实在最近的实验中得到了观察,并暗示实验温度是聚合物和蛋白质致孔剂的相反拥挤效应的原因。

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2
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本文引用的文献

1
Crowding effects on the small, fast-folding protein lambda6-85.拥挤效应对小而快速折叠的蛋白质 lambda6-85 的影响。
Faraday Discuss. 2012;157:451-62; discussion 475-500. doi: 10.1039/c2fd20009k.
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Unexpected effects of macromolecular crowding on protein stability.大分子拥挤对蛋白质稳定性的意外影响。
Biochemistry. 2012 Dec 11;51(49):9773-5. doi: 10.1021/bi300909q. Epub 2012 Nov 27.
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Macromolecular crowding and protein stability.大分子拥挤与蛋白质稳定性。
J Am Chem Soc. 2012 Oct 10;134(40):16614-8. doi: 10.1021/ja305300m. Epub 2012 Sep 27.
4
Temperature dependence of protein folding kinetics in living cells.活细胞中蛋白质折叠动力学的温度依赖性。
Proc Natl Acad Sci U S A. 2012 Oct 30;109(44):17863-7. doi: 10.1073/pnas.1201797109. Epub 2012 Jun 4.
5
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6
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J Am Chem Soc. 2011 May 11;133(18):7116-20. doi: 10.1021/ja200067p. Epub 2011 Apr 20.
7
Effects of macromolecular crowding on an intrinsically disordered protein characterized by small-angle neutron scattering with contrast matching.利用对比匹配的小角中子散射研究大分子拥挤效应对无规卷曲蛋白的影响
Biophys J. 2011 Feb 16;100(4):1120-8. doi: 10.1016/j.bpj.2011.01.020.
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Brownian dynamics simulation of protein solutions: structural and dynamical properties.布朗动力学模拟蛋白质溶液:结构和动力学性质。
Biophys J. 2010 Dec 1;99(11):3782-91. doi: 10.1016/j.bpj.2010.10.035.
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Attractive protein-polymer interactions markedly alter the effect of macromolecular crowding on protein association equilibria.具有吸引力的蛋白-聚合物相互作用显著改变了大分子拥挤对蛋白缔合平衡的影响。
Biophys J. 2010 Aug 4;99(3):914-23. doi: 10.1016/j.bpj.2010.05.013.
10
Volume exclusion and soft interaction effects on protein stability under crowded conditions.体积排阻和软相互作用对拥挤环境下蛋白质稳定性的影响。
Biochemistry. 2010 Aug 24;49(33):6984-91. doi: 10.1021/bi100727y.