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在 RNA 及其前体的合成中氧化鸟嘌呤核苷酸的消除和利用。

Elimination and utilization of oxidized guanine nucleotides in the synthesis of RNA and its precursors.

机构信息

Department of Molecular Biology, Graduate School of Medical Sciences, Kyushu University, Fukuoka 812-8582, Japan.

Department of Biochemistry and Frontier Research Center, Fukuoka Dental College, Fukuoka 814-0193, Japan.

出版信息

J Biol Chem. 2013 Mar 22;288(12):8128-8135. doi: 10.1074/jbc.M112.418723. Epub 2013 Feb 3.

DOI:10.1074/jbc.M112.418723
PMID:23376345
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3605631/
Abstract

Reactive oxygen species are produced as side products of oxygen utilization and can lead to the oxidation of nucleic acids and their precursor nucleotides. Among the various oxidized bases, 8-oxo-7,8-dihydroguanine seems to be the most critical during the transfer of genetic information because it can pair with both cytosine and adenine. During the de novo synthesis of guanine nucleotides, GMP is formed first, and it is converted to GDP by guanylate kinase. This enzyme hardly acts on an oxidized form of GMP (8-oxo-GMP) formed by the oxidation of GMP or by the cleavage of 8-oxo-GDP and 8-oxo-GTP by MutT protein. Although the formation of 8-oxo-GDP from 8-oxo-GMP is thus prevented, 8-oxo-GDP itself may be produced by the oxidation of GDP by reactive oxygen species. The 8-oxo-GDP thus formed can be converted to 8-oxo-GTP because nucleoside-diphosphate kinase and adenylate kinase, both of which catalyze the conversion of GDP to GTP, do not discriminate 8-oxo-GDP from normal GDP. The 8-oxo-GTP produced in this way and by the oxidation of GTP can be used for RNA synthesis. This misincorporation is prevented by MutT protein, which has the potential to cleave 8-oxo-GTP as well as 8-oxo-GDP to 8-oxo-GMP. When (14)C-labeled 8-oxo-GTP was applied to CaCl2-permeabilized cells of a mutT(-) mutant strain, it could be incorporated into RNA at 4% of the rate for GTP. Escherichia coli cells appear to possess mechanisms to prevent misincorporation of 8-oxo-7,8-dihydroguanine into RNA.

摘要

活性氧是氧利用的副产物,可导致核酸及其前体核苷酸氧化。在各种氧化碱基中,8-氧代-7,8-二氢鸟嘌呤似乎在遗传信息传递过程中最为关键,因为它可以与胞嘧啶和腺嘌呤配对。在鸟嘌呤核苷酸的从头合成中,首先形成 GMP,然后由鸟苷酸激酶将其转化为 GDP。该酶几乎不对 GMP 的氧化形式(由 GMP 氧化形成的 8-氧代-GMP 或由 MutT 蛋白切割 8-氧代-GDP 和 8-氧代-GTP 形成的 8-氧代-GMP)起作用。虽然由此防止了 8-氧代-GDP 的形成,但 8-氧代-GDP 本身可能是由活性氧氧化 GDP 产生的。形成的 8-氧代-GDP 可以转化为 8-氧代-GTP,因为核苷二磷酸激酶和腺苷酸激酶都可以催化 GDP 转化为 GTP,它们不能区分正常 GDP 和 8-氧代-GDP。以这种方式和通过 GTP 氧化产生的 8-氧代-GTP 可用于 RNA 合成。MutT 蛋白具有切割 8-氧代-GTP 和 8-氧代-GDP 的潜力,可防止这种错误掺入。当将(14)C 标记的 8-氧代-GTP 应用于 mutT(-)突变株的 CaCl2 通透化细胞时,它可以以 GTP 的 4%的速率掺入 RNA。大肠杆菌细胞似乎具有防止 8-氧代-7,8-二氢鸟嘌呤错误掺入 RNA 的机制。

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