Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106, USA.
J Am Chem Soc. 2013 Feb 27;135(8):2895-8. doi: 10.1021/ja311440p. Epub 2013 Feb 18.
Rapid mix-rapid freeze is a powerful method to study the mechanisms of enzyme-substrate reactions in solution. Here we report a protocol that combines this method with normal (non-resonance) Raman microscopy to enable us to define molecular details of intermediates at early time points. With this combined method, SHV-1, a class A β-lactamase, and tazobactam, a commercially available β-lactamase inhibitor, were rapidly mixed on the millisecond time scale and then were flash-frozen by injection into an isopentane solution surrounded by liquid nitrogen. The "ice" was finally freeze-dried and characterized by Raman microscopy. We found that the reaction is almost complete in solution at 25 ms, giving rise to a major population composed of the trans-enamine intermediate. Between 25 and 500 ms, minor populations of protonated imine are detected that have previously been postulated to precede enamine intermediates. However, within 1 s, the imines are converted entirely to enamines. Interestingly, with this method, we can measure directly the turnover number of SHV-1 and tazobactam. The enzyme is completely inhibited at 1:4 ratio (enzyme:inhibitor) or greater, a number that agrees with the turnover number derived from steady-state kinetic methods. This application, employing non-intensity-enhanced Raman spectroscopy, provides a general and effective route to study the early events in enzyme-substrate reactions.
快速混合-快速冷冻是研究溶液中酶-底物反应机制的强大方法。在这里,我们报告了一种将该方法与普通(非共振)拉曼显微镜相结合的方案,使我们能够在早期定义中间体的分子细节。使用这种组合方法,SHV-1(一种 A 类β-内酰胺酶)和他唑巴坦(一种市售的β-内酰胺酶抑制剂)在毫秒时间尺度上快速混合,然后通过注入液氮周围的异戊烷溶液进行快速冷冻。“冰”最终通过冷冻干燥并用拉曼显微镜进行表征。我们发现反应在 25 毫秒时在溶液中几乎完全完成,产生由反式烯胺中间体组成的主要群体。在 25 至 500 毫秒之间,检测到先前假定先于烯胺中间体的质子化亚胺的少量群体。然而,在 1 秒内,亚胺完全转化为烯胺。有趣的是,通过这种方法,我们可以直接测量 SHV-1 和他唑巴坦的周转率。当酶与抑制剂的比例达到 1:4(酶:抑制剂)或更高时,酶完全被抑制,这与从稳态动力学方法得出的周转率一致。这种应用采用非强度增强拉曼光谱,为研究酶-底物反应中的早期事件提供了一种通用有效的途径。