Biodiversity Institute of Ontario, University of Guelph, Guelph, Ontario, N1G 2W1, Canada.
Mol Ecol Resour. 2013 Nov;13(6):1108-15. doi: 10.1111/1755-0998.12082. Epub 2013 Feb 25.
Although nematodes are one of the most diverse metazoan phyla, species identification through morphology is difficult. Several genetic markers have been used for their identification, but most do not provide species-level resolution in all groups, and those that do lack primer sets effective across the phylum, precluding high-throughput processing. This study describes a cocktail of three novel primer pairs that overcome this limitation by recovering cytochrome c oxidase I (COI) barcodes from diverse nematode lineages parasitic on vertebrates, including members of three orders and eight families. Its effectiveness across a broad range of nematodes enables high-throughput processing.
尽管线虫是最具多样性的后生动物门之一,但通过形态学进行物种鉴定却很困难。已经使用了几种遗传标记来进行鉴定,但大多数标记在所有群体中都无法提供种级分辨率,而那些提供分辨率的标记缺乏在整个门中有效的引物对,从而排除了高通量处理。本研究描述了一种由三个新的引物对组成的混合物,通过从寄生在脊椎动物上的各种线虫谱系中回收细胞色素 c 氧化酶 I(COI)条形码来克服这一限制,包括三个目和八个科的成员。它在广泛的线虫中的有效性使其能够进行高通量处理。