Research Center on Aging, Department of Biochemistry and Molecular Biology, Peking University Health Science Center, Beijing, China.
EMBO J. 2013 Mar 20;32(6):858-73. doi: 10.1038/emboj.2013.35. Epub 2013 Feb 26.
Mechanisms governing the transcription of p16(INK4a), one of the master regulators of cellular senescence, have been extensively studied. However, little is known about chromatin dynamics taking place at its promoter and distal enhancer. Here, we report that Forkhead box A1 protein (FOXA1) is significantly upregulated in both replicative and oncogene-induced senescence, and in turn activates transcription of p16(INK4a) through multiple mechanisms. In addition to acting as a classic sequence-specific transcriptional activator, FOXA1 binding leads to a decrease in nucleosome density at the p16(INK4a) promoter in senescent fibroblasts. Moreover, FOXA1, itself a direct target of Polycomb-mediated repression, antagonizes Polycomb function at the p16(INK4a) locus. Finally, a systematic survey of putative FOXA1 binding sites in the p16(INK4a) genomic region revealed an ∼150 kb distal element that could loop back to the promoter and potentiate p16(INK4a) expression. Overall, our findings establish several mechanisms by which FOXA1 controls p16(INK4a) expression during cellular senescence.
细胞衰老的主要调控因子之一 p16(INK4a) 的转录调控机制已得到广泛研究。然而,其启动子和远端增强子上发生的染色质动力学变化却知之甚少。在这里,我们报告叉头框蛋白 A1(FOXA1)在复制性衰老和致癌基因诱导的衰老中均显著上调,并通过多种机制激活 p16(INK4a) 的转录。FOXA1 除了作为经典的序列特异性转录激活因子发挥作用外,其结合还会导致衰老成纤维细胞中 p16(INK4a) 启动子上核小体密度降低。此外,FOXA1 本身是多梳蛋白介导的抑制的直接靶标,可拮抗 p16(INK4a) 基因座上的多梳蛋白功能。最后,对 p16(INK4a) 基因组区域中假定的 FOXA1 结合位点进行系统调查,发现了一个约 150 kb 的远端元件,它可以回环到启动子并增强 p16(INK4a) 的表达。总之,我们的研究结果确定了 FOXA1 在细胞衰老过程中控制 p16(INK4a) 表达的几种机制。