Lee Kong-Ju-Bock, Kim Chul Koo, Chung Myung-Hoon
Department of Physics, Ewha Womans University, Seoul, 120-750 Korea ; Korea Institute for Advanced Study, Seoul, 130-722 Korea.
J Biol Phys. 2012 Mar;38(2):305-16. doi: 10.1007/s10867-011-9249-1. Epub 2011 Dec 2.
An active particle can convert its internal energy into mechanical work. We study a generalized energy-depot model of an overdamped active particle in a ratchet potential. Using well-known biological parameters for kinesin-1 and modeling ATP influx as a pulsed energy supply, we apply our model to the molecular motor system. We find that our simple model can capture the essential properties of the kinesin motor such as forward stepping, stalling, backward stepping, dependence on ATP concentration, and stall force. Our model might be quite universal in the sense that it is able to describe dynamics of various types of motors as long as realistic parameters for each motor species are adopted.
一个活性粒子可以将其内能转化为机械功。我们研究了处于棘轮势中的过阻尼活性粒子的广义能量库模型。利用驱动蛋白-1的已知生物学参数,并将ATP流入建模为脉冲能量供应,我们将模型应用于分子马达系统。我们发现,我们的简单模型能够捕捉驱动蛋白马达的基本特性,如向前步进、失速、向后步进、对ATP浓度的依赖性以及失速力。从能够描述各种类型马达的动力学这一意义上来说,我们的模型可能具有相当的通用性,只要采用每种马达物种的实际参数即可。