Microbiology, Institute for Biology II, University of Freiburg, Freiburg, Germany.
FEMS Microbiol Rev. 2013 May;37(3):384-406. doi: 10.1111/1574-6976.12019.
Classical definitions of syntrophy focus on a process, performed through metabolic interaction between dependent microbial partners, such as the degradation of complex organic compounds under anoxic conditions. However, examples from past and current scientific discoveries suggest that a new, simple but wider definition is necessary to cover all aspects of microbial syntrophy. We suggest the term 'obligately mutualistic metabolism', which still focuses on microbial metabolic cooperation but also includes an ecological aspect: the benefit for both partners. By the combined metabolic activity of microorganisms, endergonic reactions can become exergonic through the efficient removal of products and therefore enable a microbial community to survive with minimal energy resources. Here, we explain the principles of classical and non-classical syntrophy and illustrate the concepts with various examples. We present biochemical fundamentals that allow microorganism to survive under a range of environmental conditions and to drive important biogeochemical processes. Novel technologies have contributed to the understanding of syntrophic relationships in cultured and uncultured systems. Recent research highlights that obligately mutualistic metabolism is not limited to certain metabolic pathways nor to certain environments or microorganisms. This beneficial microbial interaction is not restricted to the transfer of reducing agents such as hydrogen or formate, but can also involve the exchange of organic, sulfurous- and nitrogenous compounds or the removal of toxic compounds.
经典的共生定义侧重于一个过程,即通过依赖微生物伙伴之间的代谢相互作用来完成,例如在缺氧条件下降解复杂的有机化合物。然而,过去和当前科学发现的例子表明,需要一个新的、简单但更广泛的定义来涵盖微生物共生的所有方面。我们建议使用“强制性互利代谢”一词,它仍然侧重于微生物代谢合作,但也包括生态方面:对两个合作伙伴都有好处。通过微生物的联合代谢活动,可以通过有效去除产物使吸能反应变为放能反应,从而使微生物群落能够以最少的能源资源生存。在这里,我们解释了经典和非经典共生的原则,并通过各种例子说明了这些概念。我们介绍了允许微生物在一系列环境条件下生存并驱动重要生物地球化学过程的生化基础。新技术有助于理解培养和未培养系统中的共生关系。最近的研究强调,强制性互利代谢不仅限于某些代谢途径,也不限于某些环境或微生物。这种有益的微生物相互作用不仅限于还原剂(如氢或甲酸盐)的转移,还可以涉及有机、含硫和含氮化合物的交换或有毒化合物的去除。