Department of Biochemistry and Molecular Biology, Mayo Addiction Research Center, Mayo Clinic, 200 First Street SW, Rochester, MN 55905, USA.
Zebrafish. 2013 Mar;10(1):116-8. doi: 10.1089/zeb.2013.9999. Epub 2013 Mar 28.
We are entering a new era in our ability to modify and edit the genomes of model organisms. Zinc finger nucleases (ZFNs) opened the door to the first custom nuclease-targeted genome engineering in the late 1990s. However, ZFNs remained out of reach for most research labs because of the difficulty of production, high costs, and modest efficacy in many applications. Transcription activator-like effector nucleases (TALENs) were built upon a DNA binding system discovered in a group of plant bacterial pathogens and broadened custom nuclease technology, showing significant improvements in both targeting flexibility and efficiency. Perhaps most importantly, TALENs are open source and easy to produce, providing zebrafish laboratories around the world with affordable tools that can be made in-house rapidly, at low cost, and with reliably high activity. Now a new system for targeted genome engineering derived from the CRISPR/Cas system in eubacteria and archaea promises to simplify this process further. Together, these tools will help overcome many of the bottlenecks that have constrained gene targeting in zebrafish, paving the way for advanced genome engineering applications in this model teleost.
我们正进入一个能够修改和编辑模式生物基因组的新时代。锌指核酸酶 (ZFNs) 在 20 世纪 90 年代末开创了第一个定制核酸酶靶向基因组工程的先河。然而,由于生产难度大、成本高以及在许多应用中的效果有限,ZFNs 仍然遥不可及。转录激活因子样效应核酸酶 (TALENs) 建立在一组植物病原菌中发现的 DNA 结合系统之上,拓宽了定制核酸酶技术,在靶向灵活性和效率方面都有显著提高。也许最重要的是,TALENs 是开源的,易于生产,为世界各地的斑马鱼实验室提供了负担得起的工具,可以在内部快速、低成本、高活性地制作。现在,一种源自真细菌和古细菌的 CRISPR/Cas 系统的靶向基因组工程新系统有望进一步简化这一过程。这些工具将共同帮助克服限制斑马鱼基因靶向的许多瓶颈,为该模式硬骨鱼的高级基因组工程应用铺平道路。