College of Food Science and Technology, Guangdong Ocean University, Zhanjiang, 524088, People's Republic of China.
Antonie Van Leeuwenhoek. 2013 May;103(5):1133-9. doi: 10.1007/s10482-013-9894-4. Epub 2013 Apr 2.
A bacterial strain, designated M26(T), was isolated from a fish gastrointestinal tract, collected from Zhanjiang Port, South China. 16S rRNA gene sequence analysis indicated that strain M26(T) belongs to the subclass α-Proteobacteria, being related to the genus Paracoccus, and sharing highest sequence similarity with Paracoccus alcaliphilus JCM 7364(T) (98.1 %), Paracoccus huijuniae FLN-7(T) (97.3 %), Paracoccus stylophorae KTW-16(T) (97.1 %) and Paracoccus seriniphilus DSM 14827(T) (96.9 %). The major quinone was determined to be ubiquinone Q-10, with Q-9 and Q-8 as minor components. The major fatty acid was identified as C18:1ω7c, with smaller amounts of C18:0 and C16:0. The G+C content of the genomic DNA was determined to be 64.3 mol%. The DNA hybridization value between strain M26(T) and the most closely related type strain, P. alcaliphilus, was 29.0 ± 1.0 %. The results of physiological and biochemical tests and low DNA-DNA relatedness showed that the strain could be readily distinguished from closely related species. On the basis of these phenotypic and genotypic data, strain M26(T) is concluded to represent a novel species of the genus Paracoccus, for which the name Paracoccus siganidrum sp. nov. is proposed. The type strain is M26(T) (=CCTCC AB 2012865(T) = DSM 26381(T)).
一株细菌菌株,命名为 M26(T),从中国南方湛江港采集的鱼类胃肠道中分离得到。16S rRNA 基因序列分析表明,菌株 M26(T)属于 α-变形菌亚纲,与 Paracoccus 属有关,与 Paracoccus alcaliphilus JCM 7364(T)(98.1%)、Paracoccus huijuniae FLN-7(T)(97.3%)、Paracoccus stylophorae KTW-16(T)(97.1%)和 Paracoccus seriniphilus DSM 14827(T)(96.9%)的序列相似度最高。主要醌类为泛醌 Q-10,Q-9 和 Q-8 为次要成分。主要脂肪酸为 C18:1ω7c,少量 C18:0 和 C16:0。基因组 DNA 的 G+C 含量为 64.3mol%。菌株 M26(T)与最密切相关的模式菌株 P. alcaliphilus 的 DNA 杂交值为 29.0±1.0%。生理生化试验和低 DNA-DNA 同源性的结果表明,该菌株很容易与密切相关的种区分开来。基于这些表型和基因型数据,菌株 M26(T)被认为代表了 Paracoccus 属的一个新种,建议将其命名为 Paracoccus siganidrum sp. nov.。模式菌株为 M26(T)=CCTCC AB 2012865(T)=DSM 26381(T)。