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三色荧光共振能量转移(FRET)扩展了对参与肌动蛋白丝成核的几种蛋白质之间相互作用进行定量的能力。

Three-Color FRET expands the ability to quantify the interactions of several proteins involved in actin filament nucleation.

作者信息

Wallrabe Horst, Sun Yuansheng, Fang Xiaolan, Periasamy Ammasi, Bloom George

机构信息

Keck Center for Cellular Imaging, University of Virginia, Charlottesville, VA ; Department of Biology, University of Virginia, Charlottesville, VA.

出版信息

Proc SPIE Int Soc Opt Eng. 2012 Feb 9;8226. doi: 10.1117/12.906432. Epub 2012 Jan 21.

DOI:10.1117/12.906432
PMID:23549657
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3580387/
Abstract

With traditional 2-color Förster Resonance Energy Transfer (FRET) microscopy, valuable quantitative analyses can be conducted. Correlations of donor (D), acceptor (A) and their ratios (D:A) with energy transfer efficiency (E%) or distance (r) allows measurement of changes between control and experimental samples; also, clustered vs. random assembly of cellular components can be differentiated. Essentially, only the above three parameters D, A and D:A vs. E% are the basis for these deductions. 3-color FRET uses the same basic parameters, but exponentially expands the opportunities to quantify interrelationships among 3 cellular components. We investigated a number of questions based on the results of a triple combination (F1-F2-F3) of TFP-NWASP/Venus-IQGAP1/mCherry-Actin - all involved in the nucleation of actin - to apply the extensive analysis assay possible with 3-color FRET. How do changing N-WASP or IQGAP1 fluorescence levels affect actin fluorescence? What is the effect on E% of NWASP-actin by IQGAP1 or E% of IQGAP1-actin by N-WASP? These and other questions are explored in the context of all proteins of interest being in FRET distance vs. any two in the absence of the third. 4 cases are compared based on bleed-through corrected FRET: (1) all 3 interact, (2) only F1-F3 and F2-F3 [not F1-F2], (3) only F1-F2 and F2-F3 interact [not F1-F3], (4) only F1-F2 and F1-F3 interact [not F2-F3]. Other than describing the methodology in detail, several biologically relevant results are presented showing how E% (i.e. distance), fluorescence levels and ratios are affected in each of the cases. These correlations can only be observed in a 3-fluorophore combination. 3-color FRET will greatly expand the investigative range of quantitative analysis for the life-science researcher.

摘要

利用传统的双色荧光共振能量转移(FRET)显微镜,可以进行有价值的定量分析。供体(D)、受体(A)及其比例(D:A)与能量转移效率(E%)或距离(r)之间的相关性,能够测量对照样品与实验样品之间的变化;此外,还可以区分细胞成分的聚集组装与随机组装。本质上,只有上述三个参数D、A和D:A与E%是这些推导的基础。三色FRET使用相同的基本参数,但极大地扩展了量化三种细胞成分之间相互关系的机会。我们基于TFP-NWASP/Venus-IQGAP1/mCherry-Actin的三重组合(F1-F2-F3)的结果研究了许多问题——所有这些都参与肌动蛋白的成核——以应用三色FRET可能进行的广泛分析检测。N-WASP或IQGAP1荧光水平的变化如何影响肌动蛋白荧光?IQGAP1对NWASP-肌动蛋白的E%或N-WASP对IQGAP1-肌动蛋白的E%有什么影响?在所有感兴趣的蛋白质都处于FRET距离与任意两者在没有第三者的情况下,探讨了这些及其他问题。基于扣除渗漏的FRET比较了4种情况:(1)所有三者相互作用,(2)只有F1-F3和F2-F3相互作用[不是F1-F2],(3)只有F1-F2和F2-F3相互作用[不是F1-F3],(4)只有F1-F2和F1-F3相互作用[不是F2-F3]。除了详细描述方法外,还展示了一些与生物学相关的结果,表明在每种情况下E%(即距离)、荧光水平和比例是如何受到影响的。这些相关性只能在三荧光团组合中观察到。三色FRET将极大地扩展生命科学研究人员定量分析的研究范围。

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