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调控胰腺发育的基因调控网络。

Gene regulatory networks governing pancreas development.

机构信息

Department of Developmental Biology, Stanford University School of Medicine, Stanford, CA 94305-5329, USA.

出版信息

Dev Cell. 2013 Apr 15;25(1):5-13. doi: 10.1016/j.devcel.2013.03.016.

DOI:10.1016/j.devcel.2013.03.016
PMID:23597482
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3645877/
Abstract

Elucidation of cellular and gene regulatory networks (GRNs) governing organ development will accelerate progress toward tissue replacement. Here, we have compiled reference GRNs underlying pancreas development from data mining that integrates multiple approaches, including mutant analysis, lineage tracing, cell purification, gene expression and enhancer analysis, and biochemical studies of gene regulation. Using established computational tools, we integrated and represented these networks in frameworks that should enhance understanding of the surging output of genomic-scale genetic and epigenetic studies of pancreas development and diseases such as diabetes and pancreatic cancer. We envision similar approaches would be useful for understanding the development of other organs.

摘要

阐明调控器官发育的细胞和基因调控网络(GRNs)将加速组织替代的进展。在这里,我们通过整合多种方法(包括突变分析、谱系追踪、细胞纯化、基因表达和增强子分析以及基因调控的生化研究)的数据挖掘,编译了胰腺发育的参考 GRNs。使用既定的计算工具,我们将这些网络整合并表示在框架中,这应该有助于理解基因组规模的遗传和表观遗传研究以及糖尿病和胰腺癌等疾病的胰腺发育的大量输出。我们设想类似的方法对于理解其他器官的发育也将是有用的。

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本文引用的文献

1
Neurogenin3 cooperates with Foxa2 to autoactivate its own expression.神经基因 3 与 Foxa2 合作自动激活其自身表达。
J Biol Chem. 2013 Apr 26;288(17):11705-17. doi: 10.1074/jbc.M112.388173. Epub 2013 Mar 7.
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Factors expressed by murine embryonic pancreatic mesenchyme enhance generation of insulin-producing cells from hESCs.鼠胚胰腺间质表达的因子增强了人胚胎干细胞产生胰岛素分泌细胞的能力。
Diabetes. 2013 May;62(5):1581-92. doi: 10.2337/db12-0167. Epub 2013 Jan 10.
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Ghrelin expression in the mouse pancreas defines a unique multipotent progenitor population.ghrelin 在小鼠胰腺中的表达定义了一个独特的多能祖细胞群体。
PLoS One. 2012;7(12):e52026. doi: 10.1371/journal.pone.0052026. Epub 2012 Dec 12.
4
Islet α-, β-, and δ-cell development is controlled by the Ldb1 coregulator, acting primarily with the islet-1 transcription factor.胰岛 α、β 和 δ 细胞的发育受 Ldb1 共激活因子的控制,主要与胰岛 1 转录因子协同作用。
Diabetes. 2013 Mar;62(3):875-86. doi: 10.2337/db12-0952. Epub 2012 Nov 27.
5
Pancreas-specific deletion of mouse Gata4 and Gata6 causes pancreatic agenesis.鼠 Gata4 和 Gata6 的胰腺特异性缺失导致胰腺发育不全。
J Clin Invest. 2012 Oct;122(10):3516-28. doi: 10.1172/JCI63352. Epub 2012 Sep 24.
6
A transgenic mouse marking live replicating cells reveals in vivo transcriptional program of proliferation.一种标记活复制细胞的转基因小鼠揭示了体内增殖的转录程序。
Dev Cell. 2012 Oct 16;23(4):681-90. doi: 10.1016/j.devcel.2012.08.009. Epub 2012 Sep 20.
7
Pancreatic β cell dedifferentiation as a mechanism of diabetic β cell failure.胰腺 β 细胞去分化作为糖尿病 β 细胞衰竭的一种机制。
Cell. 2012 Sep 14;150(6):1223-34. doi: 10.1016/j.cell.2012.07.029.
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Neonatal β cell development in mice and humans is regulated by calcineurin/NFAT.鼠和人新生儿β细胞的发育受钙调神经磷酸酶/NFAT 调控。
Dev Cell. 2012 Jul 17;23(1):21-34. doi: 10.1016/j.devcel.2012.05.014.
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Deconstructing pancreas developmental biology.解析胰腺发育生物学。
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Mol Cell Biol. 2012 Mar;32(6):1189-99. doi: 10.1128/MCB.06318-11. Epub 2012 Jan 9.