Department of Fisheries and Allied Aquacultures and Program of Cell and Molecular Biosciences, Aquatic Genomics Unit, Auburn University, Auburn, AL 36849, USA.
Fish Shellfish Immunol. 2013 Jul;35(1):136-45. doi: 10.1016/j.fsi.2013.04.014. Epub 2013 Apr 29.
Lysozyme is an important component of the innate immune system. In this study, four lysozyme genes including one c-type lysozyme and three g-type lysozymes were identified from channel catfish (Ictalurus punctatus). The lysozyme genes are highly conserved in their structural features as compared to those from other species. Phylogenetic analyses were conducted allowing annotation of these genes. Additional analyses using conserved syntenies allowed determination of orthologies for the c-type lysozyme. Phylogenetic analysis indicated that the g-type lysozyme may have gone through species-specific gene duplications leading to multiple copies in some teleost species. Channel catfish possessed three copies of the g-type lysozyme genes. Expression analysis revealed that the catfish lysozyme genes were expressed in a broad range of tissues. The highest levels of expression were found in head kidney, liver, spleen, and trunk kidney, compatible with the immune functions of these tissues/organs. The c-type and g-type lysozymes were drastically induced after bacterial infection, but exhibited large differences in the extent of induction and the tissue with the highest level of induction, with the g-type lysozyme being most highly induced in the head kidney whereas the other three lysozymes being most highly induced in the liver, suggesting their cooperative actions in the immune responses but difference in their detailed functions.
溶菌酶是先天免疫系统的重要组成部分。在这项研究中,从斑点叉尾鮰(Ictalurus punctatus)中鉴定出了四种溶菌酶基因,包括一种 C 型溶菌酶和三种 G 型溶菌酶。与其他物种相比,溶菌酶基因在结构特征上高度保守。进行了系统发育分析,对这些基因进行了注释。使用保守的同线性分析的进一步分析确定了 C 型溶菌酶的同源性。系统发育分析表明,G 型溶菌酶可能经历了物种特异性基因复制,导致一些硬骨鱼类物种中存在多个拷贝。斑点叉尾鮰拥有三个 G 型溶菌酶基因拷贝。表达分析显示,鱼类溶菌酶基因在广泛的组织中表达。在头肾、肝脏、脾脏和躯干肾中表达水平最高,与这些组织/器官的免疫功能相匹配。溶菌酶基因在细菌感染后被强烈诱导,但在诱导程度和诱导水平最高的组织方面存在很大差异,G 型溶菌酶在头肾中被高度诱导,而其他三种溶菌酶在肝脏中被高度诱导,表明它们在免疫反应中协同作用,但在详细功能上存在差异。