Lee Duu-Jong, Wong Biing-Teo, Adav Sunil S
Department of Chemical Engineering, National Taiwan University, Taipei, Taiwan, 106,
Appl Microbiol Biotechnol. 2014 Feb;98(3):1301-7. doi: 10.1007/s00253-013-4976-9. Epub 2013 May 22.
The strain NSC3(T), a novel, facultative, chemolithotrophic, denitrifying, alkaliphilic, sulfide-oxidizing bacterium isolated from a hot spring in Yang-Ming Mountain, Taiwan, was Gram negative, rod shaped, and motile by single polar flagella and grew facultatively by adopting a denitrifying metabolism. The 16S rRNA sequence analysis revealed that strain NSC3(T) belongs to beta subclass of the Proteobacteria and most closely related to Azoarcus evansii KB740(T) (95.44 %), Azoarcus toluvorans Td-21(T) (95.21 %), Azoarcus tolulyticus Tol-4(T) (95.08 %), and Azoarcus toluclasticus MF63(T) (94.94 %). The phylogenetic analyses based on 16S rRNA gene sequences indicated that the strain NSC3(T) formed a distinct lineage in the Betaproteobacteria and that it exhibited the highest level of sequence similarity with species of the genera Azoarcus (95.28-93.13 %). The major fatty acids of the type strain were C16:0 (26.9 %), C16:1w7c (28.9 %), C18:0 (9.6 %), and C18:1w7c/w6c (29.9 %). The DNA G+C content of genomic DNA was 63.7 mol%. On the basis of the 16S rRNA sequence similarity, phenotypic and genotypic characteristics, and chemotaxonomic data, the strain NSC3(T) could be differentiated from other species of the genus Azoarcus. Therefore, strain NSC3(T) (equal to BCRC 80111(T) and DSM 24109(T)) is proposed as a novel species in genus Azoarcus, for which the name Azoarcus taiwanensis sp. nov. is proposed. The strain NSC3(T) is deposited in Bioresource Collection and Research Center, Taiwan, under the reference number BCRC 80111(T), and German Collection of Microorganisms and Cell Cultures, Germany (DSMZ), with DSM 24109(T).
菌株NSC3(T)是从台湾阳明山的一个温泉中分离出的一种新型兼性化能自养反硝化嗜碱硫化物氧化细菌,革兰氏阴性,杆状,具单极鞭毛,能运动,通过反硝化代谢进行兼性生长。16S rRNA序列分析表明,菌株NSC3(T)属于变形菌门的β亚类,与埃文斯偶氮弧菌KB740(T)(95.44%)、耐甲苯偶氮弧菌Td-21(T)(95.21%)、溶甲苯偶氮弧菌Tol-4(T)(95.08%)和甲苯分解偶氮弧菌MF63(T)(94.94%)关系最为密切。基于16S rRNA基因序列的系统发育分析表明,菌株NSC3(T)在β-变形菌纲中形成了一个独特的分支,并且它与偶氮弧菌属物种的序列相似性最高(95.28 - 93.13%)。模式菌株的主要脂肪酸为C16:0(26.9%)、C16:1w7c(28.9%)、C18:0(9.6%)和C18:1w7c/w6c(29.9%)。基因组DNA的G+C含量为63.7 mol%。基于16S rRNA序列相似性、表型和基因型特征以及化学分类数据,菌株NSC3(T)可与偶氮弧菌属的其他物种区分开来。因此,建议将菌株NSC3(T)(等同于BCRC 80111(T)和DSM 24109(T))作为偶氮弧菌属中的一个新物种,命名为台湾偶氮弧菌(Azoarcus taiwanensis sp. nov.)。菌株NSC3(T)保藏于台湾生物资源保存及研究中心,保藏编号为BCRC 80111(T),以及德国微生物和细胞培养物保藏中心(DSMZ),保藏编号为DSM 24109(T)。