Lin Shih-Yao, Hameed Asif, Shen Fo-Ting, Liu You-Cheng, Hsu Yi-Han, Shahina Mariyam, Lai Wei-An, Young Chiu-Chung
Department of Soil and Environmental Sciences, College of Agriculture and Natural Resources, National Chung Hsing University, 250, Kuo Kuang Rd., Taichung, 402, Taiwan, ROC.
Antonie Van Leeuwenhoek. 2014 Jun;105(6):1149-62. doi: 10.1007/s10482-014-0176-6. Epub 2014 Apr 27.
A taxonomic study was carried out on a novel aerobic bacterial strain (designated CC-LY736(T)) isolated from a fermentor in Taiwan. Cells of strain CC-LY736(T) were Gram-stain negative, spiral-shaped and motile by means of a monopolar flagellum. Strain CC-LY736(T) shared the greatest degree of 16S rRNA gene sequence similarity to Azospirillum irakense DSM 11586(T) (97.2 %), Rhodocista centenaria JCM 21060(T) (96.3 %) and Rhodocista pekingensis JCM 11669(T) (96.1 %). The major fatty acids were C16:0, C16:1 ω5c, C19:0 cyclo ω8c, C18:1 ω7c/C18:1 ω6c, C16:0 3-OH and C18:1 2-OH. The predominant polar lipids included phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidyldimethylethanolamine and two unidentified glycolipids. The common major respiratory quinone was ubiquinone Q-10 and predominant polyamines were sym-homospermidine and putrescine. The DNA G+C content of strain CC-LY736(T) was 67.6 ± 0.1 mol %. During phylogenetic analysis, strain CC-LY736(T) formed a unique phyletic lineage associated with Rhodocista species. However, the combination of genetic, chemotaxonomic and physiological data clearly indicated that strain CC-LY736(T) was a novel representative of the family Rhodospirillaceae. Based on the polyphasic comparison, the name Niveispirillum fermenti gen. nov., sp. nov. is proposed; the type strain of the type species is CC-LY736(T) (= BCRC 80504(T) = LMG 27263(T)). In addition, the reclassifications of Azospirillum irakense as Niveispirillum irakense comb. nov. (type strain KBC1(T) = ATCC 51182(T) = BCRC 15764(T) = CIP 103311(T)), and Azospirillum amazonense as Nitrospirillum amazonense gen. nov., sp. nov. (type strain Am14(T) = ATCC 35119(T) = BCRC 14279(T) = DSM 3787(T)) are proposed based on the polyphasic taxonomic data obtained in this study.
对从台湾一台发酵罐中分离出的一株新型需氧细菌菌株(命名为CC-LY736(T))进行了分类学研究。CC-LY736(T)菌株细胞革兰氏染色阴性,呈螺旋状,借助单极鞭毛运动。CC-LY736(T)菌株与伊拉克固氮螺菌DSM 11586(T)(97.2%)、百岁红环菌JCM 21060(T)(96.3%)和北京红环菌JCM 11669(T)(96.1%)的16S rRNA基因序列相似度最高。主要脂肪酸为C16:0、C16:1 ω5c、C19:0环ω8c、C18:1 ω7c/C18:1 ω6c、C16:0 3-OH和C18:1 2-OH。主要极性脂包括磷脂酰胆碱、磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甲基乙醇胺、磷脂酰二甲基乙醇胺和两种未鉴定的糖脂。常见的主要呼吸醌为泛醌Q-10,主要多胺为对称高亚精胺和腐胺。CC-LY736(T)菌株的DNA G+C含量为67.6±0.1 mol%。在系统发育分析中,CC-LY736(T)菌株形成了一个与红环菌属物种相关的独特进化谱系。然而,遗传、化学分类和生理数据的综合表明,CC-LY736(T)菌株是红螺菌科的一个新代表。基于多相比较,提出了新属名发酵雪螺菌属(Niveispirillum),新种名发酵雪螺菌(Niveispirillum fermenti);模式种的模式菌株为CC-LY736(T)(=BCRC 80504(T)=LMG 27263(T))。此外,基于本研究获得的多相分类数据,提出将伊拉克固氮螺菌重新分类为伊拉克雪螺菌(Niveispirillum irakense)新组合(模式菌株KBC1(T)=ATCC 51182(T)=BCRC 15764(T)=CIP 103311(T)),以及将亚马逊固氮螺菌重新分类为亚马逊硝化螺菌属(Nitrospirillum amazonense)新属,新种(模式菌株Am14(T)=ATCC 35119(T)=BCRC 14279(T)=DSM 3787(T))。