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从台湾一台发酵罐中分离出的发酵新螺菌属新种的描述,将伊拉克固氮螺菌(1989年)转移为伊拉克新螺菌新组合,以及将亚马逊固氮螺菌(1983年)重新分类为亚马逊硝化螺菌新属

Description of Niveispirillum fermenti gen. nov., sp. nov., isolated from a fermentor in Taiwan, transfer of Azospirillum irakense (1989) as Niveispirillum irakense comb. nov., and reclassification of Azospirillum amazonense (1983) as Nitrospirillum amazonense gen. nov.

作者信息

Lin Shih-Yao, Hameed Asif, Shen Fo-Ting, Liu You-Cheng, Hsu Yi-Han, Shahina Mariyam, Lai Wei-An, Young Chiu-Chung

机构信息

Department of Soil and Environmental Sciences, College of Agriculture and Natural Resources, National Chung Hsing University, 250, Kuo Kuang Rd., Taichung, 402, Taiwan, ROC.

出版信息

Antonie Van Leeuwenhoek. 2014 Jun;105(6):1149-62. doi: 10.1007/s10482-014-0176-6. Epub 2014 Apr 27.

Abstract

A taxonomic study was carried out on a novel aerobic bacterial strain (designated CC-LY736(T)) isolated from a fermentor in Taiwan. Cells of strain CC-LY736(T) were Gram-stain negative, spiral-shaped and motile by means of a monopolar flagellum. Strain CC-LY736(T) shared the greatest degree of 16S rRNA gene sequence similarity to Azospirillum irakense DSM 11586(T) (97.2 %), Rhodocista centenaria JCM 21060(T) (96.3 %) and Rhodocista pekingensis JCM 11669(T) (96.1 %). The major fatty acids were C16:0, C16:1 ω5c, C19:0 cyclo ω8c, C18:1 ω7c/C18:1 ω6c, C16:0 3-OH and C18:1 2-OH. The predominant polar lipids included phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidyldimethylethanolamine and two unidentified glycolipids. The common major respiratory quinone was ubiquinone Q-10 and predominant polyamines were sym-homospermidine and putrescine. The DNA G+C content of strain CC-LY736(T) was 67.6 ± 0.1 mol %. During phylogenetic analysis, strain CC-LY736(T) formed a unique phyletic lineage associated with Rhodocista species. However, the combination of genetic, chemotaxonomic and physiological data clearly indicated that strain CC-LY736(T) was a novel representative of the family Rhodospirillaceae. Based on the polyphasic comparison, the name Niveispirillum fermenti gen. nov., sp. nov. is proposed; the type strain of the type species is CC-LY736(T) (= BCRC 80504(T) = LMG 27263(T)). In addition, the reclassifications of Azospirillum irakense as Niveispirillum irakense comb. nov. (type strain KBC1(T) = ATCC 51182(T) = BCRC 15764(T) = CIP 103311(T)), and Azospirillum amazonense as Nitrospirillum amazonense gen. nov., sp. nov. (type strain Am14(T) = ATCC 35119(T) = BCRC 14279(T) = DSM 3787(T)) are proposed based on the polyphasic taxonomic data obtained in this study.

摘要

对从台湾一台发酵罐中分离出的一株新型需氧细菌菌株(命名为CC-LY736(T))进行了分类学研究。CC-LY736(T)菌株细胞革兰氏染色阴性,呈螺旋状,借助单极鞭毛运动。CC-LY736(T)菌株与伊拉克固氮螺菌DSM 11586(T)(97.2%)、百岁红环菌JCM 21060(T)(96.3%)和北京红环菌JCM 11669(T)(96.1%)的16S rRNA基因序列相似度最高。主要脂肪酸为C16:0、C16:1 ω5c、C19:0环ω8c、C18:1 ω7c/C18:1 ω6c、C16:0 3-OH和C18:1 2-OH。主要极性脂包括磷脂酰胆碱、磷脂酰甘油、双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甲基乙醇胺、磷脂酰二甲基乙醇胺和两种未鉴定的糖脂。常见的主要呼吸醌为泛醌Q-10,主要多胺为对称高亚精胺和腐胺。CC-LY736(T)菌株的DNA G+C含量为67.6±0.1 mol%。在系统发育分析中,CC-LY736(T)菌株形成了一个与红环菌属物种相关的独特进化谱系。然而,遗传、化学分类和生理数据的综合表明,CC-LY736(T)菌株是红螺菌科的一个新代表。基于多相比较,提出了新属名发酵雪螺菌属(Niveispirillum),新种名发酵雪螺菌(Niveispirillum fermenti);模式种的模式菌株为CC-LY736(T)(=BCRC 80504(T)=LMG 27263(T))。此外,基于本研究获得的多相分类数据,提出将伊拉克固氮螺菌重新分类为伊拉克雪螺菌(Niveispirillum irakense)新组合(模式菌株KBC1(T)=ATCC 51182(T)=BCRC 15764(T)=CIP 103311(T)),以及将亚马逊固氮螺菌重新分类为亚马逊硝化螺菌属(Nitrospirillum amazonense)新属,新种(模式菌株Am14(T)=ATCC 35119(T)=BCRC 14279(T)=DSM 3787(T))。

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