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sp. nov.,一种新型的 ,从香港活性污泥中分离得到。

sp. nov., a novel member of isolated from activated sludge collected in Hong Kong.

机构信息

University of Chinese Academy of Sciences, Beijing 100049, PR China.

Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Nov;70(11):5799-5805. doi: 10.1099/ijsem.0.004476.

DOI:10.1099/ijsem.0.004476
PMID:32945762
Abstract

A floc-forming bacterial strain, designated HKLI-1, was isolated from the activated sludge of a municipal sewage treatment plant in Hong Kong SAR, PR China. Cells of this strain were Gram-stain-negative, strictly aerobic, catalase- and oxidase-positive, rod-shaped and motile by means of a single polar flagellum. Growth occurred at 18-37 °C (optimum, 28 °C), pH 5.5-9.0 (optimum, pH 7.5) and with 0-8.0 % (w/v) NaCl (optimum, 1-1.5 %) concentration. The major fatty acids of strain HKLI-1 were C and summed feature 3 (C ω7 and/or C ω6). The polar lipid profile contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and three unidentified lipids. The DNA G+C content was 63.5 mol% from whole genomic sequence analysis. Based on the results of 16S rRNA gene sequences analysis, this strain should be assigned to the genus and is closely related to DQS-4 (94.93 % 16S rRNA gene sequence pairwise similarity), MF63 (94.91 %) and SWub3 (94.01 %), but separate from them by large distances in different phylogenetic trees. Based on whole genome analysis, the orthologous average nucleotide identity and DNA-DNA hybridization values against four of the closest relatives were 73.03-74.83 and 17.2-23.0 %, respectively. The phylogenetic, genotypic, phenotypic and chemotaxonomic data demonstrated that strain HKLI-1 could be distinguished from its phylogenetically related species, and that this strain represented a novel species within the genus , for which the name sp. nov. is proposed. The type strain is HKLI-1 (= 72659=CCTCC AB 2019312).

摘要

一株絮凝细菌菌株,命名为 HKLI-1,从中国香港特别行政区一家城市污水处理厂的活性污泥中分离得到。该菌株的细胞革兰氏染色阴性,严格需氧,接触酶和氧化酶阳性,杆状,通过单个极生鞭毛运动。生长发生在 18-37°C(最佳温度为 28°C)、pH 值 5.5-9.0(最佳 pH 值为 7.5)和 0-8.0%(w/v)NaCl(最佳浓度为 1-1.5%)。菌株 HKLI-1 的主要脂肪酸为 C 和总和特征 3(C ω7 和/或 C ω6)。极性脂谱包含双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和三种未鉴定的脂类。全基因组序列分析显示 DNA G+C 含量为 63.5mol%。根据 16S rRNA 基因序列分析结果,该菌株应归属于 属,与 DQS-4(94.93% 16S rRNA 基因序列两两相似)、MF63(94.91%)和 SWub3(94.01%)密切相关,但在不同的系统发育树中与它们相距甚远。基于全基因组分析,与四个最接近的亲缘种的同源平均核苷酸同一性和 DNA-DNA 杂交值分别为 73.03-74.83%和 17.2-23.0%。系统发育、基因型、表型和化学分类学数据表明,菌株 HKLI-1 可与亲缘关系较近的种区分开来,并且该菌株代表了 属中的一个新种,建议将其命名为 sp. nov.。模式菌株为 HKLI-1(=72659=CCTCC AB 2019312)。

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