University of Chinese Academy of Sciences, Beijing 100049, PR China.
Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, PR China.
Int J Syst Evol Microbiol. 2020 Nov;70(11):5799-5805. doi: 10.1099/ijsem.0.004476.
A floc-forming bacterial strain, designated HKLI-1, was isolated from the activated sludge of a municipal sewage treatment plant in Hong Kong SAR, PR China. Cells of this strain were Gram-stain-negative, strictly aerobic, catalase- and oxidase-positive, rod-shaped and motile by means of a single polar flagellum. Growth occurred at 18-37 °C (optimum, 28 °C), pH 5.5-9.0 (optimum, pH 7.5) and with 0-8.0 % (w/v) NaCl (optimum, 1-1.5 %) concentration. The major fatty acids of strain HKLI-1 were C and summed feature 3 (C ω7 and/or C ω6). The polar lipid profile contained diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol and three unidentified lipids. The DNA G+C content was 63.5 mol% from whole genomic sequence analysis. Based on the results of 16S rRNA gene sequences analysis, this strain should be assigned to the genus and is closely related to DQS-4 (94.93 % 16S rRNA gene sequence pairwise similarity), MF63 (94.91 %) and SWub3 (94.01 %), but separate from them by large distances in different phylogenetic trees. Based on whole genome analysis, the orthologous average nucleotide identity and DNA-DNA hybridization values against four of the closest relatives were 73.03-74.83 and 17.2-23.0 %, respectively. The phylogenetic, genotypic, phenotypic and chemotaxonomic data demonstrated that strain HKLI-1 could be distinguished from its phylogenetically related species, and that this strain represented a novel species within the genus , for which the name sp. nov. is proposed. The type strain is HKLI-1 (= 72659=CCTCC AB 2019312).
一株絮凝细菌菌株,命名为 HKLI-1,从中国香港特别行政区一家城市污水处理厂的活性污泥中分离得到。该菌株的细胞革兰氏染色阴性,严格需氧,接触酶和氧化酶阳性,杆状,通过单个极生鞭毛运动。生长发生在 18-37°C(最佳温度为 28°C)、pH 值 5.5-9.0(最佳 pH 值为 7.5)和 0-8.0%(w/v)NaCl(最佳浓度为 1-1.5%)。菌株 HKLI-1 的主要脂肪酸为 C 和总和特征 3(C ω7 和/或 C ω6)。极性脂谱包含双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰甘油和三种未鉴定的脂类。全基因组序列分析显示 DNA G+C 含量为 63.5mol%。根据 16S rRNA 基因序列分析结果,该菌株应归属于 属,与 DQS-4(94.93% 16S rRNA 基因序列两两相似)、MF63(94.91%)和 SWub3(94.01%)密切相关,但在不同的系统发育树中与它们相距甚远。基于全基因组分析,与四个最接近的亲缘种的同源平均核苷酸同一性和 DNA-DNA 杂交值分别为 73.03-74.83%和 17.2-23.0%。系统发育、基因型、表型和化学分类学数据表明,菌株 HKLI-1 可与亲缘关系较近的种区分开来,并且该菌株代表了 属中的一个新种,建议将其命名为 sp. nov.。模式菌株为 HKLI-1(=72659=CCTCC AB 2019312)。