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结构表征一种独特的海洋动物家族 7 型纤维二糖水解酶表明纤维素酶耐盐性的机制。

Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance.

机构信息

Centre for Novel Agricultural Products, Department of Biology, University of York, York YO10 5DD, United Kingdom.

出版信息

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10189-94. doi: 10.1073/pnas.1301502110. Epub 2013 Jun 3.

Abstract

Nature uses a diversity of glycoside hydrolase (GH) enzymes to convert polysaccharides to sugars. As lignocellulosic biomass deconstruction for biofuel production remains costly, natural GH diversity offers a starting point for developing industrial enzymes, and fungal GH family 7 (GH7) cellobiohydrolases, in particular, provide significant hydrolytic potential in industrial mixtures. Recently, GH7 enzymes have been found in other kingdoms of life besides fungi, including in animals and protists. Here, we describe the in vivo spatial expression distribution, properties, and structure of a unique endogenous GH7 cellulase from an animal, the marine wood borer Limnoria quadripunctata (LqCel7B). RT-quantitative PCR and Western blot studies show that LqCel7B is expressed in the hepatopancreas and secreted into the gut for wood degradation. We produced recombinant LqCel7B, with which we demonstrate that LqCel7B is a cellobiohydrolase and obtained four high-resolution crystal structures. Based on a crystallographic and computational comparison of LqCel7B to the well-characterized Hypocrea jecorina GH7 cellobiohydrolase, LqCel7B exhibits an extended substrate-binding motif at the tunnel entrance, which may aid in substrate acquisition and processivity. Interestingly, LqCel7B exhibits striking surface charges relative to fungal GH7 enzymes, which likely results from evolution in marine environments. We demonstrate that LqCel7B stability and activity remain unchanged, or increase at high salt concentration, and that the L. quadripunctata GH mixture generally contains cellulolytic enzymes with highly acidic surface charge compared with enzymes derived from terrestrial microbes. Overall, this study suggests that marine cellulases offer significant potential for utilization in high-solids industrial biomass conversion processes.

摘要

自然界利用多种糖苷水解酶(GH)将多糖转化为单糖。由于木质纤维素生物质的解构用于生物燃料生产仍然很昂贵,因此天然 GH 多样性为开发工业酶提供了起点,特别是真菌 GH 家族 7(GH7)纤维二糖水解酶在工业混合物中提供了巨大的水解潜力。最近,除真菌外,在其他生命领域也发现了 GH7 酶,包括动物和原生动物。在这里,我们描述了一种来自动物的独特内源性 GH7 纤维素酶——海洋蛀木虫 Limnoria quadripunctata(LqCel7B)的体内空间表达分布、特性和结构。RT-qPCR 和 Western blot 研究表明,LqCel7B 在肝胰腺中表达,并分泌到肠道中用于木材降解。我们生产了重组 LqCel7B,并证明了它是一种纤维二糖水解酶,获得了四个高分辨率晶体结构。通过对 LqCel7B 与特征明确的 Hypocrea jecorina GH7 纤维二糖水解酶的晶体学和计算比较,LqCel7B 在隧道入口处表现出扩展的底物结合基序,这可能有助于底物获取和连续性。有趣的是,与真菌 GH7 酶相比,LqCel7B 表现出惊人的表面电荷,这可能是由于在海洋环境中的进化所致。我们证明 LqCel7B 的稳定性和活性保持不变,或在高盐浓度下增加,并且与来自陆地微生物的酶相比,L. quadripunctata GH 混合物通常含有具有高度酸性表面电荷的纤维素酶。总的来说,这项研究表明,海洋纤维素酶在高固含量工业生物质转化过程中具有巨大的利用潜力。

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