• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

EstU1 作为家族 VIII 羧基酯酶,其β-内酰胺酶活性的结构基础。

Structural basis for the β-lactamase activity of EstU1, a family VIII carboxylesterase.

机构信息

Marine Biotechnology Research Division, Korea Institute of Ocean Science and Technology, Ansan, 426-744, Republic of Korea; Ocean Science and Technology School, Korea Maritime University, Pusan, 606-791, Republic of Korea; Department of Marine Biotechnology, University of Science and Technology, Daejeon, 305-333, Republic of Korea.

出版信息

Proteins. 2013 Nov;81(11):2045-51. doi: 10.1002/prot.24334. Epub 2013 Aug 19.

DOI:10.1002/prot.24334
PMID:23737193
Abstract

EstU1 is a unique family VIII carboxylesterase that displays hydrolytic activity toward the amide bond of clinically used β-lactam antibiotics as well as the ester bond of p-nitrophenyl esters. EstU1 assumes a β-lactamase-like modular architecture and contains the residues Ser100, Lys103, and Tyr218, which correspond to the three catalytic residues (Ser64, Lys67, and Tyr150, respectively) of class C β-lactamases. The structure of the EstU1/cephalothin complex demonstrates that the active site of EstU1 is not ideally tailored to perform an efficient deacylation reaction during the hydrolysis of β-lactam antibiotics. This result explains the weak β-lactamase activity of EstU1 compared with class C β-lactamases. Finally, structural and sequential comparison of EstU1 with other family VIII carboxylesterases elucidates an operative molecular strategy used by family VIII carboxylesterases to extend their substrate spectrum.

摘要

EstU1 是一种独特的 VIII 族羧酸酯酶,对临床上使用的β-内酰胺类抗生素的酰胺键以及对硝基苯酯的酯键具有水解活性。EstU1 采用β-内酰胺酶样的模块化结构,包含残基 Ser100、Lys103 和 Tyr218,它们分别对应于 C 类β-内酰胺酶的三个催化残基(Ser64、Lys67 和 Tyr150)。EstU1/头孢菌素复合物的结构表明,EstU1 的活性位点在水解β-内酰胺类抗生素时不能很好地进行有效的去酰化反应。这一结果解释了 EstU1 与 C 类β-内酰胺酶相比β-内酰胺酶活性较弱的原因。最后,通过与其他 VIII 族羧酸酯酶的结构和序列比较,阐明了 VIII 族羧酸酯酶扩展其底物谱的有效分子策略。

相似文献

1
Structural basis for the β-lactamase activity of EstU1, a family VIII carboxylesterase.EstU1 作为家族 VIII 羧基酯酶,其β-内酰胺酶活性的结构基础。
Proteins. 2013 Nov;81(11):2045-51. doi: 10.1002/prot.24334. Epub 2013 Aug 19.
2
Novel metagenome-derived carboxylesterase that hydrolyzes β-lactam antibiotics.新型宏基因组来源的羧酸酯酶,可水解β-内酰胺类抗生素。
Appl Environ Microbiol. 2011 Nov;77(21):7830-6. doi: 10.1128/AEM.05363-11. Epub 2011 Sep 9.
3
A novel family VIII carboxylesterase derived from a leachate metagenome library exhibits promiscuous beta-lactamase activity on nitrocefin.一种源自渗滤液宏基因组文库的新型VIII族羧酸酯酶对头孢硝噻吩表现出混杂的β-内酰胺酶活性。
Appl Microbiol Biotechnol. 2009 Jun;83(3):491-500. doi: 10.1007/s00253-009-1895-x. Epub 2009 Feb 4.
4
Functional characterisation of a metagenome derived family VIII esterase with a deacetylation activity on β-lactam antibiotics.具有β-内酰胺抗生素去乙酰化活性的宏基因组衍生家族 VIII 酯酶的功能表征。
Biochem Biophys Res Commun. 2013 Aug 2;437(3):342-8. doi: 10.1016/j.bbrc.2013.06.076. Epub 2013 Jul 1.
5
Crystal structure of EstSRT1, a family VIII carboxylesterase displaying hydrolytic activity toward oxyimino cephalosporins.EstSRT1的晶体结构,一种对氧亚氨基头孢菌素具有水解活性的VIII族羧酸酯酶。
Biochem Biophys Res Commun. 2016 Sep 16;478(2):818-24. doi: 10.1016/j.bbrc.2016.08.031. Epub 2016 Aug 5.
6
Mechanism of acyl-enzyme complex formation from the Henry-Michaelis complex of class C β-lactamases with β-lactam antibiotics.从 C 类β-内酰胺酶与β-内酰胺类抗生素的 Henry-Michaelis 复合物形成酰-酶复合物的机制。
J Am Chem Soc. 2013 Oct 2;135(39):14679-90. doi: 10.1021/ja405319n. Epub 2013 Sep 23.
7
The deacylation mechanism of AmpC beta-lactamase at ultrahigh resolution.超高分辨率下AmpC β-内酰胺酶的去酰化机制
J Am Chem Soc. 2006 Mar 8;128(9):2970-6. doi: 10.1021/ja056806m.
8
Deacylation Mechanism and Kinetics of Acyl-Enzyme Complex of Class C β-Lactamase and Cephalothin.C类β-内酰胺酶与头孢噻吩酰基酶复合物的脱酰化机制及动力学
J Phys Chem B. 2016 Mar 17;120(10):2681-90. doi: 10.1021/acs.jpcb.5b11623. Epub 2016 Mar 8.
9
Structure of the extended-spectrum class C beta-lactamase of Enterobacter cloacae GC1, a natural mutant with a tandem tripeptide insertion.阴沟肠杆菌GC1的超广谱C类β-内酰胺酶结构,一种具有串联三肽插入的天然突变体。
Biochemistry. 1999 Aug 10;38(32):10256-61. doi: 10.1021/bi9908787.
10
Mixed quantum mechanical/molecular mechanical (QM/MM) study of the deacylation reaction in a penicillin binding protein (PBP) versus in a class C beta-lactamase.青霉素结合蛋白(PBP)与C类β-内酰胺酶中脱酰基反应的量子力学/分子力学混合(QM/MM)研究
J Am Chem Soc. 2004 Jun 23;126(24):7652-64. doi: 10.1021/ja036879a.

引用本文的文献

1
Crystal Structure of EstZF172 Catalyzing Stereoselectively ()‑CNDE in Pregabalin Biosynthesis.在普瑞巴林生物合成中催化立体选择性()-CNDE的EstZF172的晶体结构
ACS Omega. 2025 May 21;10(21):21693-21700. doi: 10.1021/acsomega.5c01054. eCollection 2025 Jun 3.
2
Alpha and Omega Classification of β-Lactamase/Transpeptidase-like Superfamily Proteins Based on the Comparison of Their Structural Catalytic Cores.基于β-内酰胺酶/转肽酶样超家族蛋白质结构催化核心比较的α和ω分类
Molecules. 2025 Apr 30;30(9):2019. doi: 10.3390/molecules30092019.
3
Potential involvement of beta-lactamase homologous proteins in resistance to beta-lactam antibiotics in gram-negative bacteria of the ESKAPEE group.
ESKAPEE 组革兰氏阴性菌中β-内酰胺酶同源蛋白在对抗β-内酰胺类抗生素耐药中的潜在作用。
BMC Genomics. 2024 May 22;25(1):508. doi: 10.1186/s12864-024-10410-2.
4
Genome-wide analysis of lipolytic enzymes and characterization of a high-tolerant carboxylesterase from .脂解酶的全基因组分析及来自……的一种高耐受性羧酸酯酶的表征
Front Microbiol. 2023 Dec 4;14:1304233. doi: 10.3389/fmicb.2023.1304233. eCollection 2023.
5
Structural and biochemical characterization of Lsa45 reveals a penicillin-binding protein with esterase activity.Lsa45的结构与生化特性揭示了一种具有酯酶活性的青霉素结合蛋白。
Process Biochem. 2023 Feb;125:141-153. doi: 10.1016/j.procbio.2022.12.010. Epub 2022 Dec 14.
6
EstG is a novel esterase required for cell envelope integrity in Caulobacter.EstG 是一种新型酯酶,对于柄杆菌细胞包膜的完整性是必需的。
Curr Biol. 2023 Jan 23;33(2):228-240.e7. doi: 10.1016/j.cub.2022.11.037. Epub 2022 Dec 13.
7
Crystal structure of a family VIII β-lactamase fold hydrolase reveals the molecular mechanism for its broad substrate scope.家族 VIII β-内酰胺酶折叠水解酶的晶体结构揭示了其广泛底物范围的分子机制。
FEBS J. 2022 Nov;289(21):6714-6730. doi: 10.1111/febs.16554. Epub 2022 Jun 27.
8
Class C β-Lactamases: Molecular Characteristics.C 类β-内酰胺酶:分子特征。
Clin Microbiol Rev. 2022 Sep 21;35(3):e0015021. doi: 10.1128/cmr.00150-21. Epub 2022 Apr 18.
9
Identification and Characterization of a Novel Carboxylesterase Belonging to Family VIII with Promiscuous Acyltransferase Activity Toward Cyanidin-3-O-Glucoside from a Soil Metagenomic Library.从土壤宏基因组文库中鉴定和表征一种属于VIII家族的新型羧酸酯酶,该酶对花青素-3-O-葡萄糖苷具有混杂的酰基转移酶活性。
Appl Biochem Biotechnol. 2023 Apr;195(4):2432-2450. doi: 10.1007/s12010-021-03614-9. Epub 2021 Jul 13.
10
Discovery and Design of Family VIII Carboxylesterases as Highly Efficient Acyltransferases.家族 VIII 羧酸酯酶作为高效酰基转移酶的发现与设计。
Angew Chem Int Ed Engl. 2021 Jan 25;60(4):2013-2017. doi: 10.1002/anie.202014169. Epub 2020 Nov 23.