Grupo de Biofísica Molecular Sérgio Mascarenhas, Instituto de Física de São Carlos, Universidade de São Paulo, Av. Trabalhador São-carlense 400, C.P. 369 São Carlos, SP 13560-970, Brazil.
Eur Biophys J. 2013 Aug;42(8):655-60. doi: 10.1007/s00249-013-0914-0. Epub 2013 Jun 11.
Dioxygenases are nonheme iron enzymes that biodegrade recalcitrant compounds, such as catechol and derivatives, released into the environment by modern industry. Intradiol dioxygenases have attracted much attention due to the interest in their use for bioremediation, which has demanded efforts towards understanding their action mechanism and also how to control it. The role of unexpected amphipatic molecules, observed in crystal structures of intradiol dioxygenases, during catalysis has been poorly explored. We report results obtained with the intradiol enzyme chlorocatechol 1,2-dioxygenase (1,2-CCD) from Pseudomonas putida subjected to delipidation. The delipidated enzyme is more stable and shows more cooperative thermal denaturation. The kinetics changes from Michaelis-Menten to a cooperative scheme, indicating that conformational changes propagate between monomers in the absence of amphipatic molecules. Furthermore, these molecules inhibit catalysis, yielding lower v(max) values. To the best of our knowledge, this is the first report concerning the effects of amphipatic molecules on 1,2-CCD function.
双加氧酶是非血红素铁酶,能够生物降解现代工业释放到环境中的顽固化合物,如儿茶酚和其衍生物。由于人们对其在生物修复中的应用很感兴趣,因此内二醇双加氧酶引起了广泛关注,这就需要努力了解其作用机制以及如何控制它。在催化过程中,观察到内二醇双加氧酶晶体结构中存在意想不到的两亲性分子,但对其作用的研究还很不完善。我们报告了用假单胞菌属的邻位儿茶酚 1,2-双加氧酶(1,2-CCD)进行去脂化实验所得到的结果。去脂化酶更稳定,表现出更协同的热变性。动力学从米氏方程转变为协同方案,表明在没有两亲性分子的情况下,构象变化在单体之间传播。此外,这些分子抑制催化作用,导致 v(max)值降低。据我们所知,这是关于两亲性分子对 1,2-CCD 功能影响的首次报道。