Faculty of Science and Literature, Department of Chemistry, Balikesir University, Balikesir, Turkey.
J Mol Model. 2013 Sep;19(9):3637-45. doi: 10.1007/s00894-013-1902-0. Epub 2013 Jun 12.
Glucopyranose is the most stable form of glucose in solution. Identification of molecular structure of glucopyranose is very important because of its biological and synthetic significance; it is not an easy task because of the large number of possible configurations. Relative energies of exocyclic hydroxymethyl rotamers and α-β anomers of D-glucopyranose have been determined at the reference MP2/6-31G(d,p) level geometry by ab initio calculations at the infinite basis set limit of MP2 approach and with inclusion of CCSD(T) correction term evaluated with the aug-cc-pVDZ basis set in vacuum, water, dimethylsulfoxide, tetrahydrofurane and ethanol. The infinite basis set limit of MP2 level was determined by two point extrapolation using aug-cc-pVTZ and aug-cc-pVQZ basis sets. Solvent effects, relative energies and binding energies have been considered applying explicit calculations and implicit solvent models.
吡喃葡萄糖是溶液中葡萄糖最稳定的形式。由于其具有重要的生物学和合成意义,因此确定吡喃葡萄糖的分子结构非常重要;但由于可能的构象数量众多,这并非易事。通过从头算方法在无限基组极限下和在真空、水、二甲基亚砜、四氢呋喃和乙醇中用 aug-cc-pVDZ 基组计算时包含 CCSD(T)校正项,在参考 MP2/6-31G(d,p) 几何构型下,用从头算方法确定了非环羟甲基旋转异构体和 D-吡喃葡萄糖的 α-β 差向异构体的相对能量。通过使用 aug-cc-pVTZ 和 aug-cc-pVQZ 基组进行两点外推,确定了 MP2 水平的无限基组极限。考虑了溶剂效应、相对能量和结合能,应用了显式计算和隐式溶剂模型。