Suppr超能文献

定量分析海洋中固氮作用受铁元素限制的 Trichodesmium IMS 101 中的固氮酶。

Quantification of nitrogenase in Trichodesmium IMS 101: implications for iron limitation of nitrogen fixation in the ocean.

机构信息

Environmental Biophysics and Molecular Ecology, Institute of Marine and Coastal Sciences, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA. Department of Earth and Environmental Sciences, Rutgers, The State University of New Jersey - Newark, Newark, NJ, USA. Department of Earth and Planetary Sciences, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA.

出版信息

Environ Microbiol Rep. 2011 Feb;3(1):54-8. doi: 10.1111/j.1758-2229.2010.00187.x.

Abstract

Iron is widely thought to limit nitrogen fixation in the open, oligotrophic ocean due to the low solubility of Fe in oxic seawater and the high Fe demand for the nitrogenase holozyme. However, empirical evidence for Fe limitation of field populations of Trichodesmium based on either incubation experiments or molecular and physiological indicators has not quantitatively related Fe supply to the cellular Fe quotas for nitrogenase. Rather, the Fe required for N2 fixation has been inferred from in vivo catalytic activity. Using a pet14b expression vector, we cloned the nif H gene (encoding the Fe-protein, which contains 4Fe atoms per subunit) from Trichodesmium IMS 101, and purified the His-tagged apoprotein with which we derived a primary standard based on quantitative Western blots. Using a standard curve derived from the cloned Trichodesmium Fe apoprotein, we measured the absolute abundance of the Fe-protein in iron-replete cultures of this marine diazotroph. At peak expression, we calculate 0.04 mg nitrogenase mg(-1) C. Assuming a conservative stoichiometry of two Fe-protein subunits per MoFe protein (which contains 15 Fe atoms per subunit, or a total of 38 atoms of Fe per holozyme), we estimate 236 µmol Fe is bound to nitrogenase per mol cellular C. This estimate is about 10 times greater than the Fe previously calculated to support diazotrophic growth under these conditions. Our results suggest that under bloom conditions in the subtropical North Atlantic and North Pacific, as much as ∼2.22 and 0.06 µmol m(-3) of Fe is bound to Trichodesmium nitrogenase respectively. Such a high quota represents between ∼50% and > 100% summer-time average particulate Fe in surface waters, suggesting the importance of this taxon for the retention and biogeochemical cycling of Fe. Moderate growth (0.10 day(-1) ) towards the end of these blooms would require a vertical flux as high as ∼23 µmol Fe day(-1)  m(-2) into the mixed layer.

摘要

铁通常被认为会限制开阔、贫营养海域的固氮作用,因为在含氧海水中铁的溶解度较低,并且固氮酶全酶对铁的需求量很大。然而,基于培养实验或分子和生理指标的现场调查,铁对束毛藻种群的限制作用并没有将铁的供应与固氮酶的细胞铁配额定量相关联。相反,固氮所需的铁是根据体内催化活性推断出来的。本研究使用 pet14b 表达载体,从束毛藻 IMS 101 中克隆了 nif H 基因(编码铁蛋白,每个亚基含有 4 个铁原子),并用 His 标记的脱辅基蛋白进行纯化,并用定量 Western blot 得出了一个初级标准。利用从克隆的束毛藻铁脱辅基蛋白得出的标准曲线,我们测量了这种海洋固氮生物在铁充足的培养物中铁蛋白的绝对丰度。在表达高峰期,我们计算出氮酶毫克(-1)C 中 0.04mg 的氮酶毫克(-1)C。假设每个 MoFe 蛋白(每个亚基含有 15 个铁原子,或整个全酶含有 38 个铁原子)结合两个铁蛋白亚基的保守化学计量,我们估计每个细胞 C 结合 236µmol 铁蛋白氮酶。这一估计值是在这些条件下支持固氮生长所需铁的 10 倍左右。我们的研究结果表明,在亚热带北大西洋和北太平洋的浮游植物大量繁殖期间,大约有 2.22 和 0.06µmol·m(-3)的铁分别结合在束毛藻氮酶上。如此高的配额代表了夏季表层水中颗粒铁的 50%到>100%,这表明该分类群对铁的保留和生物地球化学循环非常重要。在这些浮游植物大量繁殖的末期,适度的生长(0.10 天(-1))需要高达 23µmol·Fe·day(-1)·m(-2)的垂直通量进入混合层。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验