• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于配体-受体 Turing 机制控制下的肾脏分支形态发生。

Kidney branching morphogenesis under the control of a ligand-receptor-based Turing mechanism.

机构信息

Department for Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, Basel, Switzerland.

出版信息

Phys Biol. 2013 Aug;10(4):046003. doi: 10.1088/1478-3975/10/4/046003. Epub 2013 Jun 17.

DOI:10.1088/1478-3975/10/4/046003
PMID:23770927
Abstract

The main signalling proteins that control early kidney branching have been defined. Yet the underlying mechanism is still elusive. We have previously shown that a Schnakenberg-type Turing mechanism can recapitulate the branching and protein expression patterns in wild-type and mutant lungs, but it is unclear whether this mechanism would extend to other branched organs that are regulated by other proteins. Here, we show that the glial cell line-derived neurotrophic factor-RET regulatory interaction gives rise to a Schnakenberg-type Turing model that reproduces the observed budding of the ureteric bud from the Wolffian duct, its invasion into the mesenchyme and the observed branching pattern. The model also recapitulates all relevant protein expression patterns in wild-type and mutant mice. The lung and kidney models are both based on a particular receptor-ligand interaction and require (1) cooperative binding of ligand and receptor, (2) a lower diffusion coefficient for the receptor than for the ligand and (3) an increase in the receptor concentration in response to receptor-ligand binding (by enhanced transcription, more recycling or similar). These conditions are met also by other receptor-ligand systems. We propose that ligand-receptor-based Turing patterns represent a general mechanism to control branching morphogenesis and other developmental processes.

摘要

已定义控制早期肾脏分支的主要信号蛋白。然而,潜在的机制仍然难以捉摸。我们之前已经表明,Schnakenberg 型图灵机制可以再现野生型和突变型肺中的分支和蛋白质表达模式,但尚不清楚该机制是否会扩展到其他由其他蛋白质调节的分支器官。在这里,我们表明神经胶质细胞衍生的神经营养因子-RET 调节相互作用产生 Schnakenberg 型图灵模型,该模型再现了输尿管芽从沃尔夫管中出芽、侵入间质以及观察到的分支模式。该模型还再现了野生型和突变型小鼠中所有相关的蛋白质表达模式。肺和肾脏模型均基于特定的受体-配体相互作用,并且需要 (1) 配体和受体的协同结合,(2) 受体的扩散系数低于配体,以及 (3) 受体-配体结合后受体浓度增加(通过增强转录、更多的再循环或类似方式)。其他受体-配体系统也满足这些条件。我们提出基于配体-受体的图灵模式代表控制分支形态发生和其他发育过程的一般机制。

相似文献

1
Kidney branching morphogenesis under the control of a ligand-receptor-based Turing mechanism.基于配体-受体 Turing 机制控制下的肾脏分支形态发生。
Phys Biol. 2013 Aug;10(4):046003. doi: 10.1088/1478-3975/10/4/046003. Epub 2013 Jun 17.
2
Image-based modeling of kidney branching morphogenesis reveals GDNF-RET based Turing-type mechanism and pattern-modulating WNT11 feedback.基于图像的肾脏分支形态发生建模揭示了 GDNF-RET 为基础的图灵型机制和模式调节 WNT11 反馈。
Nat Commun. 2019 Jan 16;10(1):239. doi: 10.1038/s41467-018-08212-8.
3
Transcription Factor 21 Is Required for Branching Morphogenesis and Regulates the Gdnf-Axis in Kidney Development.转录因子 21 对于分支形态发生是必需的,并调节肾脏发育中的 Gdnf 轴。
J Am Soc Nephrol. 2018 Dec;29(12):2795-2808. doi: 10.1681/ASN.2017121278. Epub 2018 Oct 30.
4
Reduction of BMP4 activity by gremlin 1 enables ureteric bud outgrowth and GDNF/WNT11 feedback signalling during kidney branching morphogenesis.在肾脏分支形态发生过程中,gremlin 1对BMP4活性的降低可使输尿管芽生长以及GDNF/WNT11反馈信号传导得以实现。
Development. 2007 Jul;134(13):2397-405. doi: 10.1242/dev.02861. Epub 2007 May 23.
5
Kidney development: two tales of tubulogenesis.肾脏发育:两种小管发生的故事。
Curr Top Dev Biol. 2010;90:193-229. doi: 10.1016/S0070-2153(10)90005-7.
6
The tyrosine phosphatase Shp2 acts downstream of GDNF/Ret in branching morphogenesis of the developing mouse kidney.酪氨酸磷酸酶 Shp2 在发育中的小鼠肾脏分支形态发生中充当 GDNF/Ret 的下游分子。
Dev Biol. 2011 Dec 15;360(2):310-7. doi: 10.1016/j.ydbio.2011.09.029. Epub 2011 Oct 8.
7
An interplay of geometry and signaling enables robust lung branching morphogenesis.几何结构与信号传导的相互作用促成了强大的肺分支形态发生。
Development. 2014 Dec;141(23):4526-36. doi: 10.1242/dev.116202. Epub 2014 Oct 30.
8
GDNF and its receptors in the regulation of the ureteric branching.胶质细胞源性神经营养因子及其受体在输尿管分支调节中的作用
Int J Dev Biol. 1999;43(5):413-8.
9
Sema4C-Plexin B2 signalling modulates ureteric branching in developing kidney.Sema4C-Plexin B2 信号调节发育中肾脏的输尿管分支。
Differentiation. 2011 Feb;81(2):81-91. doi: 10.1016/j.diff.2010.10.001. Epub 2010 Oct 30.
10
Downregulation of Spry-1, an inhibitor of GDNF/Ret, causes angiotensin II-induced ureteric bud branching.Spry-1(一种GDNF/Ret抑制剂)的下调会导致血管紧张素II诱导的输尿管芽分支。
Kidney Int. 2008 Nov;74(10):1287-93. doi: 10.1038/ki.2008.378. Epub 2008 Jul 23.

引用本文的文献

1
Mechanism of branching morphogenesis inspired by diatom silica formation.受硅藻二氧化硅形成启发的分支形态发生机制。
Proc Natl Acad Sci U S A. 2024 Mar 5;121(10):e2309518121. doi: 10.1073/pnas.2309518121. Epub 2024 Feb 29.
2
Embryonic developmental process and clinical anatomy of the preperitoneal fascia and its clinical significance.腹膜前筋膜的胚胎发育过程、临床解剖及其临床意义。
Surg Radiol Anat. 2022 Dec;44(12):1531-1543. doi: 10.1007/s00276-022-03046-y. Epub 2022 Nov 20.
3
Organ-Specific Branching Morphogenesis.器官特异性分支形态发生
Front Cell Dev Biol. 2021 Jun 7;9:671402. doi: 10.3389/fcell.2021.671402. eCollection 2021.
4
Autocrine inhibition of cell motility can drive epithelial branching morphogenesis in the absence of growth.自分泌抑制细胞迁移能够在没有生长的情况下驱动上皮分支形态发生。
Philos Trans R Soc Lond B Biol Sci. 2020 Sep 14;375(1807):20190386. doi: 10.1098/rstb.2019.0386. Epub 2020 Jul 27.
5
Agent-based modeling of morphogenetic systems: Advantages and challenges.基于主体的形态发生系统建模:优势与挑战。
PLoS Comput Biol. 2019 Mar 28;15(3):e1006577. doi: 10.1371/journal.pcbi.1006577. eCollection 2019 Mar.
6
Image-based modeling of kidney branching morphogenesis reveals GDNF-RET based Turing-type mechanism and pattern-modulating WNT11 feedback.基于图像的肾脏分支形态发生建模揭示了 GDNF-RET 为基础的图灵型机制和模式调节 WNT11 反馈。
Nat Commun. 2019 Jan 16;10(1):239. doi: 10.1038/s41467-018-08212-8.
7
Mathematical Approaches of Branching Morphogenesis.分支形态发生的数学方法
Front Genet. 2018 Dec 21;9:673. doi: 10.3389/fgene.2018.00673. eCollection 2018.
8
Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction⁻Diffusion Mechanism .图灵不稳定性驱动的分支组织结构生物制造:基于反应扩散机制的动态模拟与分析
Micromachines (Basel). 2018 Mar 2;9(3):109. doi: 10.3390/mi9030109.
9
Bayesian inference of agent-based models: a tool for studying kidney branching morphogenesis.基于主体模型的贝叶斯推理:一种研究肾脏分支形态发生的工具。
J Math Biol. 2018 Jun;76(7):1673-1697. doi: 10.1007/s00285-018-1208-z. Epub 2018 Feb 1.
10
Turing Patterning Using Gene Circuits with Gas-Induced Degradation of Quorum Sensing Molecules.利用群体感应分子气体诱导降解的基因回路进行图灵模式形成
PLoS One. 2016 May 5;11(5):e0153679. doi: 10.1371/journal.pone.0153679. eCollection 2016.