Department of Biology, University of Rome Tor Vergata, Via della Ricerca Scientifica, 00133, Rome, Italy.
J Mol Model. 2013 Sep;19(9):3695-704. doi: 10.1007/s00894-013-1896-7. Epub 2013 Jun 19.
Familial amyotrophic lateral sclerosis caused by mutations in copper-zinc superoxide dismutase (SOD1) is characterized by the presence of SOD1-rich inclusions in spinal cords. It has been shown that a reduced intra-subunit disulfide bridge apo-SOD1 can rapidly initiate fibrillation forming an inter-subunits disulfide under mild, physiologically accessible conditions. Once initiated, elongation can proceed via recruitment of either apo or partially metallated disulfide-intact SOD1 and the presence of copper, but not zinc, ions inhibit fibrillation. We propose a structural model, refined through molecular dynamics simulations, that, taking into account these experimental findings, provides a molecular explanation for the initiation and the elongation of SOD1 fibrils in physiological conditions. The model indicates the occurrence of a new dimeric unit, prone to interact one with the other due to the presence of a wide hydrophobic surface and specific electrostatic interactions. The model has dimensions consistent with the SOD1 fibril size observed through electron microscopy and provides a structural basis for the understanding of SOD1 fibrillation.
由铜锌超氧化物歧化酶(SOD1)突变引起的家族性肌萎缩侧索硬化症的特征是脊髓中存在富含 SOD1 的包涵体。已经表明,一个减少的亚单位二硫键 apo-SOD1 可以在温和的、生理上可及的条件下迅速引发纤维形成,形成亚单位间二硫键。一旦引发,伸长可以通过招募 apo 或部分金属化的二硫键完整的 SOD1 进行,并且铜离子而不是锌离子的存在抑制纤维形成。我们提出了一个结构模型,该模型通过分子动力学模拟进行了细化,考虑到这些实验结果,为生理条件下 SOD1 纤维的起始和伸长提供了分子解释。该模型表明存在一个新的二聚体单元,由于存在广泛的疏水面和特定的静电相互作用,易于相互作用。该模型的尺寸与通过电子显微镜观察到的 SOD1 纤维的尺寸一致,并为理解 SOD1 纤维形成提供了结构基础。