Sukweenadhi Johan, Kim Yeon-Ju, Lee Kwang Je, Koh Sung-Cheol, Hoang Van-An, Nguyen Ngoc-Lan, Yang Deok-Chun
Korean Ginseng Center and Ginseng Genetic Resource Bank, Kyung Hee University, Seocheon-dong, Giheung-gu, Yongin-si, 449-701, Gyeonggi-do, Republic of Korea.
Antonie Van Leeuwenhoek. 2014 Nov;106(5):935-45. doi: 10.1007/s10482-014-0263-8. Epub 2014 Aug 29.
Strain DCY84(T), a Gram-stain positive, rod-shaped, aerobic, spore-forming bacterium, motile by means of peritrichous flagella, was isolated from humus soil from Yongin forest in Gyeonggi province, South Korea. Strain DCY84(T) shared the highest sequence similarity with Paenibacillus barengoltzii KACC 15270(T) (96.86 %), followed by Paenibacillus timonensis KACC 11491(T) (96.49 %) and Paenibacillus phoenicis NBRC 106274(T) (95.77 %). Strain DCY84(T) was found to able to grow best in TSA at temperature 30 °C, at pH 8 and at 0.5 % NaCl. MK-7 menaquinone was identified as the isoprenoid quinone. The major polar lipids were identified as phosphatidylethanolamine, an unidentified aminophospholipid, two unidentified aminolipids and an unidentified polar lipid. The peptidoglycan was found to contain the amino acids meso-diaminopimelic acid, alanine and D-glutamic acid. The major fatty acids of strain DCY84(T) were identified as branched chain anteiso-C15:0, saturated C16:0 and branched chain anteiso-C17:0. The cell wall sugars of strain DCY84(T) were found to comprise of ribose, galactose and xylose. The major polyamine was identified as spermidine. The DNA G+C content was determined to be 62.6 mol%. After 6 days of incubation, strain DCY84(T) produced 52.96 ± 1.85 and 72.83 ± 2.86 µg/ml L-indole-3-acetic acid, using media without L-tryptophan and supplemented with L-tryptophan, respectively. Strain DCY84(T) was also found to be able to solubilize phosphate and produce siderophores. On the basis of the phenotypic characteristics, genotypic analysis and chemotaxonomic characteristics, strain DCY84(T) is considered to represent a novel species of the genus Paenibacillus, for which the name Paenibacillus yonginensis sp. nov. is proposed. The type strain is DCY84(T) (=KCTC 33428(T) = JCM 19885(T)).
菌株DCY84(T)是一种革兰氏阳性、杆状、需氧、产芽孢的细菌,借助周生鞭毛运动,从韩国京畿道龙仁市森林的腐殖土中分离得到。菌株DCY84(T)与巴氏类芽孢杆菌KACC 15270(T)的序列相似性最高(96.86%),其次是蒂莫内斯类芽孢杆菌KACC 11491(T)(96.49%)和凤仙花类芽孢杆菌NBRC 106274(T)(95.77%)。发现菌株DCY84(T)在胰蛋白胨大豆琼脂培养基(TSA)中,于30°C、pH 8和0.5% NaCl条件下生长最佳。MK-7甲萘醌被鉴定为类异戊二烯醌。主要极性脂类被鉴定为磷脂酰乙醇胺、一种未鉴定的氨基磷脂、两种未鉴定的氨基脂类和一种未鉴定的极性脂类。发现肽聚糖含有内消旋二氨基庚二酸、丙氨酸和D-谷氨酸。菌株DCY84(T)的主要脂肪酸被鉴定为支链anteiso-C15:0、饱和C16:0和支链anteiso-C17:0。发现菌株DCY84(T)的细胞壁糖类由核糖、半乳糖和木糖组成。主要多胺被鉴定为亚精胺。DNA G+C含量测定为62.6 mol%。培养6天后,菌株DCY84(T)分别在不添加L-色氨酸和添加L-色氨酸的培养基中产生52.96±1.85和72.83±2.86 μg/ml的L-吲哚-3-乙酸。还发现菌株DCY84(T)能够溶解磷酸盐并产生铁载体。基于表型特征、基因型分析和化学分类特征,菌株DCY84(T)被认为代表类芽孢杆菌属的一个新物种,为此提出新名称永仁类芽孢杆菌(Paenibacillus yonginensis sp. nov.)。模式菌株为DCY84(T)(=KCTC 33428(T)=JCM 19885(T))。