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STAU1 结合 3'UTRIRAlus 补充核滞留以保护细胞免受 PKR 介导的翻译关闭。

STAU1 binding 3' UTR IRAlus complements nuclear retention to protect cells from PKR-mediated translational shutdown.

机构信息

Department of Biochemistry and Biophysics, School of Medicine and Dentistry.

出版信息

Genes Dev. 2013 Jul 1;27(13):1495-510. doi: 10.1101/gad.220962.113.

DOI:10.1101/gad.220962.113
PMID:23824540
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3713430/
Abstract

For a number of human genes that encode transcripts containing inverted repeat Alu elements (IRAlus) within their 3' untranslated region (UTR), product mRNA is efficiently exported to the cytoplasm when the IRAlus, which mediate nuclear retention, are removed by alternative polyadenylation. Here we report a new mechanism that promotes gene expression by targeting mRNAs that maintain their 3' UTR IRAlus: Binding of the dsRNA-binding protein Staufen1 (STAU1) to 3' UTR IRAlus inhibits nuclear retention so as to augment the nuclear export of 3' UTR IRAlus-containing mRNAs (IRAlus mRNAs). Moreover, we found that 3' UTR IRAlus-bound STAU1 enhances 3' UTR IRAlus mRNA translation by precluding protein kinase R (PKR) binding, which obviates PKR activation, eukaryotic translation initiation factor 2α (eIF2α) phosphorylation, and repression of global cell translation. Thus, STAU1 binding to 3' UTR IRAlus functions along with 3' UTR IRAlus-mediated nuclear retention to suppress the shutdown of cellular translation triggered by PKR binding to endogenous cytoplasmic dsRNAs. We also show that a changing STAU1/PKR ratio contributes to myogenesis via effects on the 3' UTR IRAlus of mRNA encoding the microRNA-binding protein LIN28.

摘要

对于一些人类基因,其编码的转录本在 3'非翻译区(UTR)中含有反向重复 Alu 元件(IRAlus),当通过选择性多聚腺苷酸化去除介导核保留的 IRAlus 时,产物 mRNA 会有效地被输出到细胞质中。在这里,我们报告了一种新的机制,通过靶向保留其 3'UTRIRAlus 的 mRNA 来促进基因表达:双链 RNA 结合蛋白 Staufen1(STAU1)与 3'UTRIRAlus 的结合抑制核保留,从而增强含有 3'UTRIRAlus 的 mRNAs(IRAlus mRNAs)的核输出。此外,我们发现,与 3'UTRIRAlus 结合的 STAU1 通过排除蛋白激酶 R(PKR)结合来增强 3'UTRIRAlus mRNA 的翻译,从而避免 PKR 激活、真核翻译起始因子 2α(eIF2α)磷酸化以及全局细胞翻译的抑制。因此,STAU1 与 3'UTRIRAlus 的结合与 3'UTRIRAlus 介导的核保留一起,抑制了 PKR 与内源性细胞质 dsRNA 结合引发的细胞翻译关闭。我们还表明,STAU1/PKR 比值的变化通过影响编码 microRNA 结合蛋白 LIN28 的 mRNA 的 3'UTRIRAlus 对成肌作用产生影响。

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本文引用的文献

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Control of myogenesis by rodent SINE-containing lncRNAs.长散在核 RNA 调控的鼠源性 SINE 内含子长非编码 RNA 在成肌生成中的作用
Genes Dev. 2013 Apr 1;27(7):793-804. doi: 10.1101/gad.212639.112. Epub 2013 Apr 4.
2
Staufen1 dimerizes through a conserved motif and a degenerate dsRNA-binding domain to promote mRNA decay.Staufen1 通过一个保守基序和一个简并 dsRNA 结合域形成二聚体,以促进 mRNA 降解。
Nat Struct Mol Biol. 2013 Apr;20(4):515-24. doi: 10.1038/nsmb.2528. Epub 2013 Mar 24.
3
Staufen2 functions in Staufen1-mediated mRNA decay by binding to itself and its paralog and promoting UPF1 helicase but not ATPase activity.Staufen2 通过与自身及其同源物结合,促进 UPF1 解旋酶但不促进 ATP 酶活性,从而在 Staufen1 介导的 mRNA 降解中发挥作用。
Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):405-12. doi: 10.1073/pnas.1213508110. Epub 2012 Dec 20.
4
How does Lin28 let-7 control development and disease?Lin28 通过 let-7 如何控制发育和疾病?
Trends Cell Biol. 2012 Sep;22(9):474-82. doi: 10.1016/j.tcb.2012.06.001. Epub 2012 Jul 9.
5
Inverted Alu dsRNA structures do not affect localization but can alter translation efficiency of human mRNAs independent of RNA editing.反向 Alu dsRNA 结构不会影响定位,但可以独立于 RNA 编辑改变人类 mRNA 的翻译效率。
Nucleic Acids Res. 2012 Sep 1;40(17):8637-45. doi: 10.1093/nar/gks590. Epub 2012 Jun 25.
6
3'-UTR-located inverted Alu repeats facilitate mRNA translational repression and stress granule accumulation.3'-UTR 定位的反向 Alu 重复序列促进 mRNA 翻译抑制和应激颗粒积累。
Nucleus. 2012 Jul 1;3(4):359-69. doi: 10.4161/nucl.20827. Epub 2012 Jun 12.
7
The RNA-binding protein Staufen1 is increased in DM1 skeletal muscle and promotes alternative pre-mRNA splicing.RNA 结合蛋白 Staufen1 在 DM1 骨骼肌中增加,并促进选择性前体 mRNA 剪接。
J Cell Biol. 2012 Mar 19;196(6):699-712. doi: 10.1083/jcb.201108113.
8
Alu elements: know the SINEs.Alu 元件:了解 SINE。
Genome Biol. 2011 Dec 28;12(12):236. doi: 10.1186/gb-2011-12-12-236.
9
Protein kinase PKR and RNA adenosine deaminase ADAR1: new roles for old players as modulators of the interferon response.蛋白激酶 PKR 和 RNA 腺苷脱氨酶 ADAR1:作为干扰素反应调节剂的旧角色的新作用。
Curr Opin Immunol. 2011 Oct;23(5):573-82. doi: 10.1016/j.coi.2011.08.009. Epub 2011 Sep 15.
10
lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements.lncRNAs 通过 Alu 元件与 3'UTR 形成双链体来反式激活 STAU1 介导的 mRNA 降解。
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