Chen Xiao, Peng Xin, Zhang Peng, Yang Shenyun, Liu Min
Zhejiang Mariculture Research Institute , Wenzhou, Zhejiang , China and.
Mitochondrial DNA. 2014 Apr;25(2):91-2. doi: 10.3109/19401736.2013.784751. Epub 2013 Jul 8.
We firstly presented the complete mitogenome of the spadenose shark Scoliodon macrorhynchos (Carcharhinidae, Carcharhiniformes). The mitogenome is 16,693 bp long and contains 13 protein-coding genes, two rRNAs, 22 tRNAs and one control region, a typical vertebrate arrangement. The codon usage bias was different between the H-strand and L-strand encoded protein genes. All tRNA genes have the typical cloverleaf secondary structure excepting tRNA-Ser2, in which the dihydrouridine (DHU) arm is replaced by a simple loop with 12 unpaired nucleotides. A termination associated sequence and three conserved sequence blocks (CSB I-III) were identified in the control region, which were considered associating with the replication and transcription of mitogenome.
我们首次展示了大吻斜齿鲨(真鲨科,真鲨目)的完整线粒体基因组。该线粒体基因组长度为16,693 bp,包含13个蛋白质编码基因、两个rRNA、22个tRNA和一个控制区,呈典型的脊椎动物排列。H链和L链编码的蛋白质基因密码子使用偏好有所不同。除了tRNA-Ser2,所有tRNA基因都具有典型的三叶草二级结构,其中二氢尿嘧啶(DHU)臂被一个含有12个未配对核苷酸的简单环所取代。在控制区鉴定出一个终止相关序列和三个保守序列块(CSB I-III),它们被认为与线粒体基因组的复制和转录相关。