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准确量化超分子化学中结合的方法。

Accurate method to quantify binding in supramolecular chemistry.

机构信息

Institute of Chemistry, University of Tartu, Ravila 14a, 50411 Tartu, Estonia.

出版信息

J Org Chem. 2013 Aug 16;78(16):7796-808. doi: 10.1021/jo400626p. Epub 2013 Aug 1.

DOI:10.1021/jo400626p
PMID:23848503
Abstract

An approach for accurate and comparable measurement of host-guest binding affinities is introduced whereby differences in binding strength (ΔlogKass values) are measured between two host molecules toward a particular guest under identical solvent conditions. Measuring differences instead of absolute values enables obtaining highly accurate results, because many of the uncertainty sources (the solvation/association state of the guest in solution, deviations in solvent composition, etc.) cancel out. As a proof of concept, this method was applied to the measurement of the binding strength of 28 synthetic anion receptors toward acetate in acetonitrile containing 0.5% water. The receptors included differently substituted indolocarbazoles, ureas, thioureas, and some others. Possible deprotonation of more acidic receptors of each compound class by acetate was checked by measuring their acidities (ΔpKa values) relative to acetic acid in the same solvent. A self-consistent (consistency standard deviation 0.04 log units) binding affinity scale ranging for around 2.7 log units was constructed from the results. Absolute logKass values were found by anchoring the scale to the absolute logKass values of two receptor molecules, determined independently by direct measurements. This new approach is expected to find use in accurate quantification of a wide range of binding processes relevant to supramolecular chemistry.

摘要

介绍了一种准确且可比的测量主客体结合亲和力的方法,通过在相同溶剂条件下测量两个主体分子对特定客体的结合强度差异(ΔlogKass 值)来实现。测量差异而不是绝对值可以获得非常准确的结果,因为许多不确定来源(客体在溶液中的溶剂化/缔合状态、溶剂组成的偏差等)相互抵消。作为概念验证,该方法应用于测量 28 种合成阴离子受体与乙腈中 0.5%水的乙酸盐的结合强度。受体包括不同取代的吲哚咔唑、脲、硫脲等。通过测量每种化合物类别的更酸性受体与相同溶剂中乙酸的酸度(ΔpKa 值),检查了它们可能被乙酸盐去质子化的情况。从结果中构建了一个自洽的(一致性标准偏差为 0.04 个对数单位)结合亲和力范围,约为 2.7 个对数单位。通过将该标度锚定到通过直接测量独立确定的两个受体分子的绝对 logKass 值,找到了绝对 logKass 值。预计这种新方法将在准确量化与超分子化学相关的广泛结合过程中得到应用。

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