Division of Structural Biology, The Wellcome Trust Centre for Human Genetics, University of Oxford, Headington, Oxford OX3 7BN, UK.
Structure. 2013 Aug 6;21(8):1384-95. doi: 10.1016/j.str.2013.06.017. Epub 2013 Jul 25.
The hallmark of a virus is its capsid, which harbors the viral genome and is formed from protein subunits, which assemble following precise geometric rules. dsRNA viruses use an unusual protein multiplicity (120 copies) to form their closed capsids. We have determined the atomic structure of the capsid protein (P1) from the dsRNA cystovirus Φ8. In the crystal P1 forms pentamers, very similar in shape to facets of empty procapsids, suggesting an unexpected assembly pathway that proceeds via a pentameric intermediate. Unlike the elongated proteins used by dsRNA mammalian reoviruses, P1 has a compact trapezoid-like shape and a distinct arrangement in the shell, with two near-identical conformers in nonequivalent structural environments. Nevertheless, structural similarity with the analogous protein from the mammalian viruses suggests a common ancestor. The unusual shape of the molecule may facilitate dramatic capsid expansion during phage maturation, allowing P1 to switch interaction interfaces to provide capsid plasticity.
病毒的标志是其衣壳,它包含病毒基因组,由蛋白质亚基组成,这些亚基按照精确的几何规则组装。dsRNA 病毒使用一种不寻常的蛋白质多样性(120 个拷贝)来形成它们的封闭衣壳。我们已经确定了 dsRNA 胞质瘤 Φ8 的衣壳蛋白(P1)的原子结构。在晶体中,P1 形成五聚体,与空衣壳的小面非常相似,这表明存在一种意想不到的组装途径,该途径通过五聚体中间产物进行。与 dsRNA 哺乳动物呼肠孤病毒使用的长形蛋白不同,P1 具有紧凑的梯形形状,在壳中具有独特的排列,在不同结构环境中具有两个几乎相同的构象。然而,与哺乳动物病毒类似蛋白的结构相似性表明存在共同的祖先。分子的这种不寻常形状可能有助于噬菌体成熟过程中衣壳的剧烈扩张,允许 P1 切换相互作用界面以提供衣壳可塑性。