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环介导等温扩增法与聚合酶链反应检测及鉴别马立克氏病病毒1、2和3型的比较

Comparison of loop-mediated isothermal amplification and PCR for the detection and differentiation of Marek's disease virus serotypes 1, 2, and 3.

作者信息

Woźniakowski Grzegorz, Samorek-Salamonowicz Elzbieta, Kozdruń Wojciech

机构信息

Department of Poultry Viral Diseases, National Veterinary Research Institute, Partyzantów 57 Avenue, 24-100 Puławy, Poland.

出版信息

Avian Dis. 2013 Jun;57(2 Suppl):539-43. doi: 10.1637/10328-082012-ResNote.1.

Abstract

The previously conducted study on loop-mediated isothermal amplification (LAMP) has shown its usefulness for the detection of Marek's disease virus (MDV) virulent field strains. The current study improves the previously designed LAMP method with an additional pair of loop primers, which accelerates the reaction, and describes two other LAMP procedures for the specific detection of FC126 strain of turkey herpesvirus and nonpathogenic SB-1 strain. The developed LAMP procedures were also confirmed and compared with PCR. Each LAMP reaction used three pairs of specific primers designed to target the nucleotide sequence of the very virulent MDV strain, the SB-1 strain of MDV-2, and turkey herpesvirus, respectively. All LAMP reactions were flexible and provided reliable results at a wide range of incubation temperatures from 54.0 to 62.3 C in 15 to 90 min. LAMP does not need any thermocyclers, because all assays were conducted in a water bath. The green fluorescence signal was recorded under ultraviolet illumination in LAMP samples containing virulent MDV and turkey herpesvirus where SYBR Green was added to the reaction mixture, whereas the SB-1-positive samples presented orange illumination after GelRed staining solution. The sensitivity of the three LAMP reactions ranged from 2 log10 plaque-forming units (PFU)/ml of the virulent MDV HPRS-16 strain and turkey herpesvirus (HVT) to 3 log10 PFU/ml of the SB-1 nonpathogenic strain. The sensitivity of the compared PCR was lower by 1-2 log10 PFU/ml. The conducted studies have shown that developed LAMP methods may be used instead of PCR for the detection and differentiation of virulent and nonpathogenic MDV strains used in prophylaxis against MD. LAMP may be conducted without access to thermocyclers.

摘要

先前关于环介导等温扩增(LAMP)的研究表明,其在检测马立克氏病病毒(MDV)强毒田间毒株方面具有实用性。当前研究通过添加一对环引物改进了先前设计的LAMP方法,这加快了反应速度,并描述了另外两种用于特异性检测火鸡疱疹病毒FC126株和非致病性SB - 1株的LAMP程序。所开发的LAMP程序也得到了验证,并与聚合酶链反应(PCR)进行了比较。每个LAMP反应使用了三对特异性引物,分别针对超强毒MDV株、MDV - 2的SB - 1株和火鸡疱疹病毒的核苷酸序列设计。所有LAMP反应都具有灵活性,在15至90分钟内,于54.0至62.3℃的广泛孵育温度范围内均能提供可靠结果。LAMP不需要任何热循环仪,因为所有检测均在水浴中进行。在向反应混合物中添加了SYBR Green的含有强毒MDV和火鸡疱疹病毒的LAMP样品中,在紫外光照射下记录到绿色荧光信号,而SB - 1阳性样品在经GelRed染色液染色后呈现橙色光照。三种LAMP反应的灵敏度范围为强毒MDV HPRS - 16株和火鸡疱疹病毒(HVT)的2 log10蚀斑形成单位(PFU)/毫升至SB - 1非致病性毒株的3 log10 PFU/毫升。相比之下,PCR的灵敏度低1 - 2 log10 PFU/毫升。所进行的研究表明,所开发的LAMP方法可用于替代PCR,以检测和区分用于预防MD的强毒和非致病性MDV毒株。LAMP可以在不使用热循环仪的情况下进行。

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