Suppr超能文献

细胞色素 p450 和 p420 中血红素结合和配体转换的研究。

Investigations of heme ligation and ligand switching in cytochromes p450 and p420.

机构信息

Department of Physics and Center for Interdisciplinary Research on Complex Systems, Northeastern University, Boston, Massachusetts 02115, United States.

出版信息

Biochemistry. 2013 Aug 27;52(34):5941-51. doi: 10.1021/bi400541v. Epub 2013 Aug 14.

Abstract

It is generally accepted that the inactive P420 form of cytochrome P450 (CYP) involves the protonation of the native cysteine thiolate to form a neutral thiol heme ligand. On the other hand, it has also been suggested that recruitment of a histidine to replace the native cysteine thiolate ligand might underlie the P450 → P420 transition. Here, we discuss resonance Raman investigations of the H93G myoglobin (Mb) mutant in the presence of tetrahydrothiophene (THT) or cyclopentathiol (CPSH), and on pressure-induced cytochrome P420cam (CYP101), that show a histidine becomes the heme ligand upon CO binding. The Raman mode near 220 cm⁻¹, normally associated with the Fe-histidine vibration in heme proteins, is not observed in either reduced P420cam or the reduced H93G Mb samples, indicating that histidine is not the ligand in the reduced state. The absence of a mode near 220 cm⁻¹ is also inconsistent with a generalization of the suggestion that the 221 cm⁻¹ Raman mode, observed in the P420-CO photoproduct of inducible nitric oxide synthase (iNOS), arises from a thiol-bound ferrous heme. This leads us to assign the 218 cm⁻¹ mode observed in the 10 ns P420cam-CO photoproduct Raman spectrum to a Fe-histidine vibration, in analogy to many other histidine-bound heme systems. Additionally, the inverse correlation plots of the νFe-His and νCO frequencies for the CO adducts of P420cam and the H93G analogs provide supporting evidence that histidine is the heme ligand in the P420-CO-bound state. We conclude that, when CO binds to the ferrous P420 state, a histidine ligand is recruited as the heme ligand. The common existence of an HXC-Fe motif in many CYP systems allows the C → H ligand switch to occur with only minor conformational changes. One suggested conformation of P420-CO involves the addition of another turn in the proximal L helix so that, when the protonated Cys ligand is dissociated from the heme, it can become part of the helix, and the heme is ligated by the His residue from the adjoining loop region. In other systems, such as iNOS and CYP3A4 (where the HXC-Fe motif is not found), a somewhat larger conformational change would be necessary to recuit a nearby histidine.

摘要

人们普遍认为,细胞色素 P450(CYP)的非活性 P420 形式涉及到天然半胱氨酸硫醇的质子化,形成中性硫醇血红素配体。另一方面,也有人认为,招募组氨酸取代天然半胱氨酸硫醇配体可能是 P450→P420 转变的基础。在这里,我们讨论了在四氢噻吩(THT)或环戊硫醇(CPSH)存在下,血红蛋白(Mb)H93G 突变体的共振拉曼研究,以及在压力诱导的细胞色素 P420cam(CYP101)上的研究,表明当 CO 结合时,组氨酸成为血红素配体。在还原型 P420cam 或还原型 H93G Mb 样品中,都没有观察到 220 cm⁻¹ 附近的 Raman 模式,该模式通常与血红素蛋白中 Fe-组氨酸振动有关,这表明组氨酸不是还原状态下的配体。该模式的不存在也与 221 cm⁻¹ Raman 模式的普遍假设不一致,该模式在诱导型一氧化氮合酶(iNOS)的 P420-CO 光产物中观察到,是由硫醇结合的亚铁血红素引起的。这使得我们将在 10 ns P420cam-CO 光产物拉曼光谱中观察到的 218 cm⁻¹ 模式分配给 Fe-组氨酸振动,与许多其他组氨酸结合的血红素系统类似。此外,P420cam 和 H93G 类似物的 CO 加合物的 νFe-His 和 νCO 频率的逆相关图提供了支持性证据,表明组氨酸是 P420-CO 结合状态下的血红素配体。我们得出结论,当 CO 结合到亚铁 P420 状态时,组氨酸配体被招募为血红素配体。在许多 CYP 系统中,共同存在的 HXC-Fe 基序允许仅通过较小的构象变化发生 C→H 配体转换。P420-CO 的一种建议构象涉及在近端 L 螺旋上增加另一个螺旋,使得当质子化的 Cys 配体从血红素中解离时,它可以成为螺旋的一部分,而血红素由来自相邻环区域的 His 残基连接。在其他系统中,如 iNOS 和 CYP3A4(其中不存在 HXC-Fe 基序),则需要进行稍大的构象变化才能招募附近的组氨酸。

相似文献

5
Proximal ligand motions in H93G myoglobin.H93G肌红蛋白中的近端配体运动。
Eur J Biochem. 2002 Oct;269(19):4879-86. doi: 10.1046/j.1432-1033.2002.03193.x.

引用本文的文献

4
Structural Insights on the Conversion of Cytochrome P450 to P420.细胞色素P450向P420转化的结构见解
ACS Omega. 2022 May 27;7(22):18481-18485. doi: 10.1021/acsomega.2c00960. eCollection 2022 Jun 7.
7
On the occurrence of cytochrome P450 in viruses.关于病毒中细胞色素 P450 的出现。
Proc Natl Acad Sci U S A. 2019 Jun 18;116(25):12343-12352. doi: 10.1073/pnas.1901080116. Epub 2019 Jun 5.
8
Spectroscopic evidence supporting neutral thiol ligation to ferrous heme iron.支持亚铁血红素铁与中性硫醇配位的光谱证据。
J Biol Inorg Chem. 2018 Oct;23(7):1085-1092. doi: 10.1007/s00775-018-1611-3. Epub 2018 Sep 24.

本文引用的文献

2
Structural basis for conservation in the CYP51 family.CYP51家族保守性的结构基础。
Biochim Biophys Acta. 2011 Jan;1814(1):88-93. doi: 10.1016/j.bbapap.2010.06.006. Epub 2010 Jun 11.
9
Structure and chemistry of cytochrome P450.细胞色素P450的结构与化学性质
Chem Rev. 2005 Jun;105(6):2253-77. doi: 10.1021/cr0307143.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验