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关于如何报告基因组偶然发现的建议?我们需要谈谈!

Recommendations for returning genomic incidental findings? We need to talk!

机构信息

Department of Bioethics and Humanities, University of Washington, Seattle, Washington, USA.

出版信息

Genet Med. 2013 Nov;15(11):854-9. doi: 10.1038/gim.2013.113. Epub 2013 Aug 1.

Abstract

The American College of Medical Genetics and Genomics recently issued recommendations for reporting incidental findings from clinical whole-genome sequencing and whole-exome sequencing. The recommendations call for evaluating a specific set of genes as part of all whole-genome sequencing/whole-exome sequencing and reporting all pathogenic variants irrespective of patient age. The genes are associated with highly penetrant disorders for which treatment or prevention is available. The effort to generate a list of genes with actionable findings is commendable, but the recommendations raise several concerns. They constitute a call for opportunistic screening, through intentional effort to identify pathogenic variants in specified genes unrelated to the clinical concern that prompted testing. Yet for most of the genes, we lack evidence about the predictive value of testing, genotype penetrance, spectrum of phenotypes, and efficacy of interventions in unselected populations. Furthermore, the recommendations do not allow patients to decline the additional findings, a position inconsistent with established norms. Finally, the recommendation to return adult-onset disease findings when children are tested is inconsistent with current professional consensus, including other policy statements of the American College of Medical Genetics and Genomics. Instead of premature practice recommendations, we call for robust dialogue among stakeholders to define a pathway to normatively sound, evidence-based guidelines.

摘要

美国医学遗传学与基因组学学会最近发布了关于报告临床全基因组测序和全外显子组测序偶然发现的建议。这些建议要求评估一组特定的基因作为所有全基因组测序/全外显子组测序的一部分,并报告所有致病性变异,无论患者年龄大小。这些基因与治疗或预防有效的高外显率疾病有关。努力生成具有可操作性发现的基因列表是值得称赞的,但这些建议引起了一些关注。它们呼吁进行机会性筛查,即通过有目的的努力,识别与促使检测的临床关注点无关的特定基因中的致病性变异。然而,对于大多数基因,我们缺乏关于检测预测值、基因型外显率、表型谱和未选择人群干预措施疗效的证据。此外,这些建议不允许患者拒绝额外的发现,这与既定规范不一致。最后,建议在为儿童进行检测时报告成年发病疾病的发现,这与当前的专业共识不一致,包括美国医学遗传学与基因组学学会的其他政策声明。我们呼吁利益相关者之间进行有力的对话,而不是仓促提出实践建议,以确定一条通向规范合理、基于证据的指南的道路。

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本文引用的文献

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Incidental findings in clinical genomics: a clarification.临床基因组学中的偶然发现:一项澄清
Genet Med. 2013 Aug;15(8):664-6. doi: 10.1038/gim.2013.82. Epub 2013 Jul 4.
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Currents in contemporary bioethics.当代生物伦理学中的思潮。
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Issues concerning the evaluation and regulation of predictive genetic testing.预测性基因检测的评估与监管问题。
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