Department of Biomedical Informatics, Columbia University, New York, NY 10032, United States.
J Biomed Inform. 2013 Dec;46(6):1060-7. doi: 10.1016/j.jbi.2013.07.014. Epub 2013 Aug 3.
Information overload is a significant problem facing online clinical trial searchers. We present eTACTS, a novel interactive retrieval framework using common eligibility tags to dynamically filter clinical trial search results.
eTACTS mines frequent eligibility tags from free-text clinical trial eligibility criteria and uses these tags for trial indexing. After an initial search, eTACTS presents to the user a tag cloud representing the current results. When the user selects a tag, eTACTS retains only those trials containing that tag in their eligibility criteria and generates a new cloud based on tag frequency and co-occurrences in the remaining trials. The user can then select a new tag or unselect a previous tag. The process iterates until a manageable number of trials is returned. We evaluated eTACTS in terms of filtering efficiency, diversity of the search results, and user eligibility to the filtered trials using both qualitative and quantitative methods.
eTACTS (1) rapidly reduced search results from over a thousand trials to ten; (2) highlighted trials that are generally not top-ranked by conventional search engines; and (3) retrieved a greater number of suitable trials than existing search engines.
eTACTS enables intuitive clinical trial searches by indexing eligibility criteria with effective tags. User evaluation was limited to one case study and a small group of evaluators due to the long duration of the experiment. Although a larger-scale evaluation could be conducted, this feasibility study demonstrated significant advantages of eTACTS over existing clinical trial search engines.
A dynamic eligibility tag cloud can potentially enhance state-of-the-art clinical trial search engines by allowing intuitive and efficient filtering of the search result space.
信息过载是在线临床试验搜索者面临的一个重大问题。我们提出了 eTACTS,这是一种使用常见合格标签动态过滤临床试验搜索结果的新型交互式检索框架。
eTACTS 从自由文本临床试验合格标准中挖掘常见的合格标签,并使用这些标签对试验进行索引。在初始搜索后,eTACTS 向用户呈现一个代表当前结果的标签云。当用户选择一个标签时,eTACTS 仅保留其合格标准中包含该标签的试验,并根据标签频率和剩余试验中的共同出现生成一个新的标签云。然后,用户可以选择一个新的标签或取消选择以前的标签。该过程迭代,直到返回可管理数量的试验。我们使用定性和定量方法评估了 eTACTS 的过滤效率、搜索结果的多样性以及用户对过滤试验的合格性。
eTACTS(1)迅速将搜索结果从一千多个试验减少到十个;(2)突出显示了通常不会被传统搜索引擎排名靠前的试验;(3)检索到了比现有搜索引擎更多的合适试验。
eTACTS 通过使用有效的标签对合格标准进行索引,实现了直观的临床试验搜索。由于实验持续时间较长,用户评估仅限于一个案例研究和一小部分评估者。尽管可以进行更大规模的评估,但这项可行性研究表明,eTACTS 相对于现有的临床试验搜索引擎具有显著优势。
动态合格标签云可以通过允许直观和高效地过滤搜索结果空间,从而增强最先进的临床试验搜索引擎。