Aix-Marseille Université, CNRS, LCB UMR7283, Marseille, France.
PLoS One. 2013 Jul 25;8(7):e69360. doi: 10.1371/journal.pone.0069360. Print 2013.
Clostridium cellulolyticum, a mesophilic anaerobic bacterium, produces highly active enzymatic complexes called cellulosomes. This strain was already shown to bind to cellulose, however the molecular mechanism(s) involved is not known. In this context we focused on the gene named hycP, encoding a 250-kDa protein of unknown function, containing a Family-3 Carbohydrate Binding Module (CBM3) along with 23 hyaline repeat modules (HYR modules). In the microbial kingdom the gene hycP is only found in C. cellulolyticum and the very close strain recently sequenced Clostridium sp BNL1100. Its presence in C. cellulolyticum guided us to analyze its function and its putative role in adhesion of the cells to cellulose. The CBM3 of HycP was shown to bind to crystalline cellulose and was assigned to the CBM3b subfamily. No hydrolytic activity on cellulose was found with a mini-protein displaying representative domains of HycP. A C. cellulolyticum inactivated hycP mutant strain was constructed, and we found that HycP is neither involved in binding of the cells to cellulose nor that the protein has an obvious role in cell growth on cellulose. We also characterized the role of the cellulosome scaffolding protein CipC in adhesion of C. cellulolyticum to cellulose, since cellulosome scaffolding protein has been proposed to mediate binding of other cellulolytic bacteria to cellulose. A second mutant was constructed, where cipC was inactivated. We unexpectedly found that CipC is only partly involved in binding of C. cellulolyticum to cellulose. Other mechanisms for cellulose adhesion may therefore exist in C. cellulolyticum. In addition, no cellulosomal protuberances were observed at the cellular surface of C. cellulolyticum, what is in contrast to reports from several other cellulosomes producing strains. These findings may suggest that C. cellulolyticum has no dedicated molecular mechanism to aggregate the cellulosomes at the cellular surface.
产纤维梭菌是一种嗜温厌氧细菌,能产生高效的酶复合物,称为纤维小体。该菌已被证实能与纤维素结合,但具体的结合机制尚不清楚。在这种情况下,我们集中研究了一个名为 hycP 的基因,该基因编码一种未知功能的 250kDa 蛋白质,含有一个家族 3 碳水化合物结合模块(CBM3)和 23 个透明质酸重复模块(HYR 模块)。在微生物王国中,基因 hycP 仅存在于产纤维梭菌和最近测序的紧密相关的菌株 Clostridium sp. BNL1100 中。该基因在产纤维梭菌中的存在指导我们分析其功能及其在细胞与纤维素黏附中的潜在作用。HycP 的 CBM3 被证明能与结晶纤维素结合,并被分配到 CBM3b 亚家族。含有 HycP 代表性结构域的小型蛋白质没有发现对纤维素的水解活性。构建了产纤维梭菌的 hycP 缺失突变株,发现 HycP 既不参与细胞与纤维素的结合,也不在细胞在纤维素上的生长中起明显作用。我们还对细胞外纤维素体支架蛋白 CipC 在产纤维梭菌与纤维素黏附中的作用进行了表征,因为细胞外纤维素体支架蛋白被提议介导其他纤维素分解菌与纤维素的结合。构建了第二个突变株,其中 cipC 被失活。我们出人意料地发现 CipC 仅部分参与了产纤维梭菌与纤维素的结合。因此,产纤维梭菌可能存在其他纤维素黏附机制。此外,在产纤维梭菌的细胞表面未观察到细胞外纤维素体的突起,这与其他几个产生细胞外纤维素体的菌株的报告形成对比。这些发现可能表明产纤维梭菌没有专门的分子机制将细胞外纤维素体聚集在细胞表面。