Diallo Karidia, Lehotzky Erica, Zhang Jing, Zhou Zhiyong, de Rivera Ivette Lorenzana, Murillo Wendy E, Nkengasong John, Sabatier Jennifer, Zhang Guoqing, Yang Chunfu
1 International Laboratory Branch, Division of Global HIV/AIDS, CGH, Centers for Disease Control and Prevention , Atlanta, Georgia.
AIDS Res Hum Retroviruses. 2014 Jan;30(1):67-73. doi: 10.1089/aid.2013.0127. Epub 2013 Aug 14.
Whatman 903 filter paper is the only filter paper that has been used for HIV drug resistance (HIVDR) genotyping in resource-limited settings. In this study, we evaluated another dried blood specimen collection device, termed SampleTanker(®) (ST), for HIVDR genotyping. Blood specimens from 123 antiretroviral therapy (ART)-experienced patients were used to prepare ST whole blood and ST plasma specimens; they were then stored at ambient temperature for 2 or 4 weeks. The remaining plasma specimens were stored at -80°C and used as frozen plasma controls. Frozen plasma viral load (VL) was determined using the Roche Amplicor HIV-1 Monitor test, v.1.5 and 50 specimens with VL ≥3.00 log10 copies/ml were genotyped using the broadly sensitive genotyping assay. The medium VL for the 50 frozen plasma specimens with VL ≥3.00 log10 was 3.58 log10 copies/ml (IQR: 3.32-4.11) and 96.0% (48/50) of them were genotyped. Comparing to frozen plasma specimens, significantly lower genotyping rates were obtained from ST whole blood (48.98% and 42.85%) and ST plasma specimens (36.0% and 36.0%) stored at ambient temperature for 2 and 4 weeks, respectively (p<0.001). Nucleotide sequence identity and resistance profile analyses between the matched frozen plasma and ST whole blood or ST plasma specimens revealed high nucleotide sequence identities and concordant resistance profiles (98.1% and 99.0%, and 96.6% and 98.9%, respectively). Our results indicate that with the current design, the ST may not be the ideal dried blood specimen collection device for HIVDR monitoring for ART patients in resource-limited settings.
沃特曼903滤纸是唯一一种在资源有限环境中用于HIV耐药性(HIVDR)基因分型的滤纸。在本研究中,我们评估了另一种用于HIVDR基因分型的干血标本采集装置,即SampleTanker(®)(ST)。来自123名接受过抗逆转录病毒治疗(ART)的患者的血标本用于制备ST全血和ST血浆标本;然后将它们在室温下保存2周或4周。其余血浆标本保存在-80°C并用作冷冻血浆对照。使用罗氏Amplicor HIV-1监测检测试剂盒v.1.5测定冷冻血浆病毒载量(VL),并使用广泛敏感的基因分型检测方法对50份VL≥3.00 log10拷贝/ml的标本进行基因分型。50份VL≥3.00 log10的冷冻血浆标本的平均VL为3.58 log10拷贝/ml(IQR:3.32 - 4.11),其中96.0%(48/50)成功进行了基因分型。与冷冻血浆标本相比,在室温下分别保存2周和4周的ST全血(48.98%和42.85%)和ST血浆标本(36.0%和36.0%)的基因分型率显著更低(p<0.001)。匹配的冷冻血浆与ST全血或ST血浆标本之间的核苷酸序列同一性和耐药性谱分析显示,核苷酸序列同一性高且耐药性谱一致(分别为98.1%和99.0%,以及96.6%和98.9%)。我们的结果表明,就目前的设计而言,对于资源有限环境中接受ART治疗的患者,ST可能不是用于HIVDR监测的理想干血标本采集装置。