Department of Life Sciences and Biotechnology, Kyungpook National University, Daegu 702-701, Republic of Korea.
J Microbiol Biotechnol. 2013 Oct 28;23(10):1347-56. doi: 10.4014/jmb1306.06068.
Tricholoma matsutake, an ectomycorrhiza that has mutual relationships with the rootlet of Pinus denisflora, forms a fruiting body that serves as a valuable food in Asia. However, the artificial culture of this fungus has not been successful. Soil fungi, including T. matsutake, coexist with many other microorganisms and plants; therefore, complex microbial communities have an influence on the fruiting body formation of T. matsutake. Here, we report on the structures of fungal communities associated with the fairy ring of T. matsutake through the pyrosequencing method. Soil samples were collected inside the fairy ring zone, in the fairy ring zone, and outside the fairy ring zone. A total of 37,125 sequencing reads were obtained and 728 to 1,962 operational taxonomic units (OTUs) were observed in the sampling zones. The fairy ring zone had the lowest OTUs and the lowest fungal diversity of all sampling zones. The number of OTUs and fungal taxa inside and outside the fairy ring zone was, respectively, about 2 times and 1.5 times higher than the fairy ring. Taxonomic analysis showed that each sampling zone has different fungal communities. In particular, out of 209 genera total, 6 genera in the fairy ring zone, such as Hemimycena, were uniquely present and 31 genera, such as Mycena, Boletopsis, and Repetophragma, were specifically absent. The results of metagenomic analysis based on the pyrosequencing indicate a decrease of fungal communities in the fairy ring zone and changes of fungal communities depending on the fairy ring growth of T. matsutake.
松口蘑(Tricholoma matsutake)是一种与马尾松(Pinus denisflora)根须共生的外生菌根真菌,其形成的子实体是亚洲地区的一种有价值的食品。然而,这种真菌的人工栽培尚未成功。土壤真菌,包括松口蘑,与许多其他微生物和植物共存;因此,复杂的微生物群落会影响松口蘑子实体的形成。在这里,我们通过焦磷酸测序法报告了与松口蘑仙女环相关的真菌群落结构。从仙女环内区、仙女环区和仙女环外区采集土壤样本。共获得 37125 条测序reads,在采样区观察到 728 到 1962 个操作分类单元(OTUs)。仙女环区的 OTUs 最少,真菌多样性最低。仙女环内区和外区的 OTUs 数量分别约为仙女环的 2 倍和 1.5 倍。分类分析表明,每个采样区都有不同的真菌群落。特别是在总共 209 个属中,有 6 个属(如 Hemimycena)仅存在于仙女环区,而有 31 个属(如 Mycena、Boletopsis 和 Repetophragma)则特异性缺失。基于焦磷酸测序的宏基因组分析结果表明,仙女环区的真菌群落减少,并且随着松口蘑仙女环的生长,真菌群落发生变化。