National Veterinary Research Institute, Department of Biochemistry, Partyzantów 57, 24-100 Puławy, Poland.
J Virol Methods. 2013 Dec;194(1-2):94-101. doi: 10.1016/j.jviromet.2013.08.006. Epub 2013 Aug 14.
Nested PCR and qPCR (quantitative PCR) tests based on glycoprotein B (gB) gene were designed for detecting Bovine herpesvirus 6 (BoHV6) in bovine whole blood samples and wild ruminant blood clots (deer and roe-deer). This virus, commonly known as BLHV (bovine lymphotropic herpesvirus) belongs to the Herpesviridae family, subfamily Gammaherpesvirinae and Macavirus genus. DNA isolated from 92 dairy cow blood samples and 69 wild ruminant clots were examined for the presence of BoHV6 using nested PCR and qPCR tests. Viral DNA was detected by using nested PCR in 59 out of 92 bovine blood samples (64.1%), and by qPCR in 68 out of 92 bovine blood samples (73.9%), but none out of 69 DNA samples isolated from wild ruminant blood clots, was positive in both assays. The specificity of nested PCR and qPCR was confirmed by using BoHV1, BoHV4, BoHV6, BFV, BIV, and BLV DNA. The sensitivity of nested PCR and qPCR was determined using a serially 10-fold diluted vector pCR2.1HgB (2 × 10(0)-2 × 10(6)copies/reaction). In this testing, qPCR was more sensitive than the nested PCR, detecting two copies of BoHV6 whilst the limit of detection for nested PCR was 20 copies. In all qPCR assays, the coefficients of determination (R(2)) ranged between 0.990 and 0.999, and the calculated amplification efficiencies (Eff%) within the range of 89.7-106.9. The intra- and inter-assay CV (coefficient of variation) values did not exceed 4%.
基于糖蛋白 B (gB) 基因的巢式 PCR 和 qPCR (定量 PCR) 检测方法被设计用于检测牛疱疹病毒 6 (BoHV6) 在牛全血样本和野生反刍动物血凝块 (鹿和狍) 中的存在。这种病毒通常被称为 BLHV(牛淋巴嗜性疱疹病毒),属于疱疹病毒科、γ疱疹病毒亚科和巨细胞病毒属。使用巢式 PCR 和 qPCR 检测方法,对 92 份奶牛血样和 69 份野生反刍动物血凝块的 DNA 进行 BoHV6 检测。在 92 份牛血样本中,有 59 份样本(64.1%)通过巢式 PCR 检测到病毒 DNA,有 68 份样本(73.9%)通过 qPCR 检测到病毒 DNA,但 69 份野生反刍动物血凝块的 DNA 样本均未在两种检测方法中呈阳性。使用 BoHV1、BoHV4、BoHV6、BFV、BIV 和 BLV DNA 对巢式 PCR 和 qPCR 的特异性进行了验证。通过对一系列 10 倍稀释的载体 pCR2.1HgB(2×10(0)-2×10(6) 拷贝/反应)进行检测,确定了巢式 PCR 和 qPCR 的敏感性。在这项测试中,qPCR 比巢式 PCR 更敏感,可检测到两个拷贝的 BoHV6,而巢式 PCR 的检测限为 20 个拷贝。在所有 qPCR 检测中,决定系数 (R(2)) 在 0.990 到 0.999 之间,计算得出的扩增效率 (Eff%) 在 89.7%到 106.9%之间。内和间分析的 CV(变异系数)值均不超过 4%。