*Department of Biochemistry and Molecular Biology, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, 08193 Barcelona, Spain.
Biochem J. 2013 Nov 15;456(1):99-108. doi: 10.1042/BJ20130123.
Vertebrate secreted RNases (ribonucleases) are small proteins that play important roles in RNA metabolism, angiogenesis or host defence. In the present study we describe the antimicrobial properties of the N-terminal domain of the hcRNases (human canonical RNases) and show that their antimicrobial activity is well conserved among their lineage. Furthermore, all domains display a similar antimicrobial mechanism, characterized by bacteria agglutination followed by membrane permeabilization. The results of the present study show that, for all antimicrobial hcRNases, (i) activity is retained at the N-terminus and (ii) the antimicrobial mechanism is conserved. Moreover, using computational analysis we show that antimicrobial propensity may be conserved at the N-terminus for all vertebrate RNases, thereby suggesting that a defence mechanism could be a primary function in vertebrate RNases and that the N-terminus was selected to ensure this property. In a broader context, from the overall comparison of the peptides' physicochemical and biological properties, general correlation rules could be drawn to assist in the structure-based development of antimicrobial agents.
脊椎动物分泌的 RNases(核糖核酸酶)是在 RNA 代谢、血管生成或宿主防御中发挥重要作用的小蛋白。在本研究中,我们描述了 hcRNases(人规范 RNases)的 N 端结构域的抗菌特性,并表明它们的抗菌活性在其谱系中得到很好的保守。此外,所有结构域都表现出类似的抗菌机制,其特征是细菌聚集,随后是膜通透性。本研究的结果表明,对于所有具有抗菌活性的 hcRNases,(i)活性保留在 N 端,(ii)抗菌机制得到保守。此外,通过计算分析,我们表明,所有脊椎动物 RNases 的 N 端可能都具有抗菌倾向,这表明防御机制可能是脊椎动物 RNases 的主要功能,而 N 端被选择来确保这种特性。从更广泛的角度来看,通过对肽的理化性质和生物学性质的整体比较,可以得出一般的相关规则,以协助基于结构的抗菌剂的开发。