Division of Molecular Biosciences, Imperial College London , London SW7 2AZ, U.K.
Biochemistry. 2013 Sep 24;52(38):6684-94. doi: 10.1021/bi400517b. Epub 2013 Sep 11.
Phospholamban is an integral membrane protein that controls the calcium balance in cardiac muscle cells. As the function and regulation of this protein require the active involvement of low populated states in equilibrium with the native state, it is of great interest to acquire structural information about them. In this work, we calculate the conformations and populations of the ground state and the three main excited states of phospholamban by incorporating nuclear magnetic resonance residual dipolar couplings as replica-averaged structural restraints in molecular dynamics simulations. We then provide a description of the manner in which phosphorylation at Ser16 modulates the activity of the protein by increasing the sizes of the populations of its excited states. These results demonstrate that the approach that we describe provides a detailed characterization of the different states of phospholamban that determine the function and regulation of this membrane protein. We anticipate that the knowledge of conformational ensembles enable the design of new dominant negative mutants of phospholamban by modulating the relative populations of its conformational substates.
磷酸化酶调控蛋白是一种整合膜蛋白,控制心肌细胞中的钙平衡。由于该蛋白的功能和调节需要与天然状态平衡的低种群状态的积极参与,因此获取有关其结构信息具有重要意义。在这项工作中,我们通过将核磁共振残磁偶联作为分子动力学模拟中的复制品平均结构限制纳入计算,得出了磷酸化酶调控蛋白的基态和三个主要激发态的构象和种群。然后,我们描述了 Ser16 磷酸化如何通过增加其激发态的种群大小来调节蛋白质的活性。这些结果表明,我们所描述的方法提供了对决定该膜蛋白功能和调节的不同磷酸化酶调控蛋白状态的详细描述。我们预计构象集合的知识可以通过调节其构象亚基的相对种群来设计新的磷酸化酶调控蛋白的显性负突变体。