1 Biostatistics Department, Harvard School of Public Health, Boston, Massachusetts.
Am J Respir Crit Care Med. 2013 Oct 15;188(8):941-7. doi: 10.1164/rccm.201302-0263OC.
Previous studies of chronic obstructive pulmonary disease (COPD) have suggested that genetic factors play an important role in the development of disease. However, single-nucleotide polymorphisms that are associated with COPD in genome-wide association studies have been shown to account for only a small percentage of the genetic variance in phenotypes of COPD, such as spirometry and imaging variables. These phenotypes are highly predictive of disease, and family studies have shown that spirometric phenotypes are heritable.
To assess the heritability and coheritability of four major COPD-related phenotypes (measurements of FEV1, FEV1/FVC, percent emphysema, and percent gas trapping), and COPD affection status in smokers of non-Hispanic white and African American descent using a population design.
Single-nucleotide polymorphisms from genome-wide association studies chips were used to calculate the relatedness of pairs of individuals and a mixed model was adopted to estimate genetic variance and covariance.
In the non-Hispanic whites, estimated heritabilities of FEV1 and FEV1/FVC were both about 37%, consistent with estimates in the literature from family-based studies. For chest computed tomography scan phenotypes, estimated heritabilities were both close to 25%. Heritability of COPD affection status was estimated as 37.7% in both populations.
This study suggests that a large portion of the genetic risk of COPD is yet to be discovered and gives rationale for additional genetic studies of COPD. The estimates of coheritability (genetic covariance) for pairs of the phenotypes suggest considerable overlap of causal genetic loci.
先前关于慢性阻塞性肺疾病(COPD)的研究表明,遗传因素在疾病的发展中起着重要作用。然而,全基因组关联研究中与 COPD 相关的单核苷酸多态性表明,它们仅能解释 COPD 表型(如肺活量测定和影像学变量)中遗传变异的一小部分。这些表型对疾病具有高度预测性,并且家族研究表明肺活量测定表型是可遗传的。
采用人群设计,评估非裔美国人和非裔美国人中与 COPD 相关的四个主要表型(FEV1、FEV1/FVC、肺气肿百分比和气体潴留百分比的测量值)以及 COPD 发病情况的遗传力和共遗传力。
使用全基因组关联研究芯片中的单核苷酸多态性来计算个体对的相关性,并采用混合模型来估计遗传方差和协方差。
在非裔白人群体中,FEV1 和 FEV1/FVC 的估计遗传力均约为 37%,与家族研究中的文献估计值一致。对于胸部计算机断层扫描表型,估计的遗传力均接近 25%。在两个群体中,COPD 发病情况的遗传力估计值均为 37.7%。
这项研究表明,COPD 的大部分遗传风险尚未被发现,并为 COPD 的进一步遗传研究提供了依据。对表型对的共遗传力(遗传协方差)的估计表明,因果遗传位点有相当大的重叠。