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内切纤维素酶催化结构域插入热稳定的共识锚蛋白支架中:对稳定性和纤维素酶活性的影响。

Insertion of endocellulase catalytic domains into thermostable consensus ankyrin scaffolds: effects on stability and cellulolytic activity.

机构信息

Institute for Multiscale Modeling of Biological Interactions, Johns Hopkins University, Baltimore, Maryland, USA.

出版信息

Appl Environ Microbiol. 2013 Nov;79(21):6684-96. doi: 10.1128/AEM.02121-13. Epub 2013 Aug 23.

Abstract

Degradation of cellulose for biofuels production holds promise in solving important environmental and economic problems. However, the low activities (and thus high enzyme-to-substrate ratios needed) of hydrolytic cellulase enzymes, which convert cellulose into simple sugars, remain a major barrier. As a potential strategy to stabilize cellulases and enhance their activities, we have embedded cellulases of extremophiles into hyperstable α-helical consensus ankyrin domain scaffolds. We found the catalytic domains CelA (CA, GH8; Clostridium thermocellum) and Cel12A (C12A, GH12; Thermotoga maritima) to be stable in the context of the ankyrin scaffold and to be active against both soluble and insoluble substrates. The ankyrin repeats in each fusion are folded, although it appears that for the C12A catalytic domain (CD; where the N and C termini are distant in the crystal structure), the two flanking ankyrin domains are independent, whereas for CA (where termini are close), the flanking ankyrin domains stabilize each other. Although the activity of CA is unchanged in the context of the ankyrin scaffold, the activity of C12A is increased between 2- and 6-fold (for regenerated amorphous cellulose and carboxymethyl cellulose substrates) at high temperatures. For C12A, activity increases with the number of flanking ankyrin repeats. These results showed ankyrin arrays to be a promising scaffold for constructing designer cellulosomes, preserving or enhancing enzymatic activity and retaining thermostability. This modular architecture will make it possible to arrange multiple cellulase domains at a precise spacing within a single polypeptide, allowing us to search for spacings that may optimize reactivity toward the repetitive cellulose lattice.

摘要

用于生物燃料生产的纤维素降解在解决重要的环境和经济问题方面具有广阔的前景。然而,将纤维素转化为简单糖的水解纤维素酶的活性(因此需要的酶与底物的比例很高)仍然是一个主要障碍。作为一种稳定纤维素酶并提高其活性的潜在策略,我们已经将极端微生物的纤维素酶嵌入到超稳定的α-螺旋共识锚蛋白结构域支架中。我们发现 CelA(CA,GH8;嗜热梭菌)和 Cel12A(C12A,GH12;海栖热袍菌)的催化结构域在锚蛋白支架的背景下是稳定的,并且对可溶性和不溶性底物都具有活性。每个融合体中的锚蛋白重复序列都是折叠的,尽管对于 C12A 催化结构域(晶体结构中 N 和 C 末端较远)来说,两个侧翼的锚蛋白结构域是独立的,而对于 CA(末端较近)来说,侧翼的锚蛋白结构域彼此稳定。尽管 CA 的活性在锚蛋白支架的背景下没有改变,但 C12A 的活性在高温下提高了 2-6 倍(对于再生无定形纤维素和羧甲基纤维素底物)。对于 C12A,活性随侧翼锚蛋白重复数的增加而增加。这些结果表明,锚蛋白阵列是构建设计纤维素酶的有前途的支架,可以保持或提高酶活性并保留热稳定性。这种模块化架构将使我们能够在单个多肽内以精确的间隔排列多个纤维素酶结构域,从而可以搜索可能优化对重复纤维素晶格的反应性的间隔。

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